RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 MRPS14O60783 128 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TGM6O95932 706 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 SRPRAP08240 638 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 HOXC6P09630 235 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 CD8BP10966 210 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 PRG2P13727 222 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 HLA-EP13747 358 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 GDF5P43026 501 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 PSMD4P55036 377 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TNFRSF17Q02223 184 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 KLHL26Q53HC5 615 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 CARD16Q5EG05 197 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 KIAA1161Q6NSJ0 714 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 GAL3ST3Q96A11 431 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TMEM39BQ9GZU3 492 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF385DQ9H6B1 395 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 ASH2LQ9UBL3 628 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 KLK4Q9Y5K2 254 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 IQCMA0A1B0GVH7 501 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TCRBV5S2A0A599 114 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 FZD9O00144 591 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 DPYSL4O14531 572 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 KERAO60938 352 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 SLC43A1O75387 559 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 WDPCPO95876 746 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TRBC1P01850 177 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.324e-9■■■■■ 29
PPP4R3B-205ENST00000616288 CNR2P34972 360 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 ALDH9A1P49189 494 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 CPT1AP50416 773 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 XKP51811 444 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 KYAT1Q16773 422 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TTLL9Q3SXZ7 439 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 DCST1Q5T197 706 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 HSDL2Q6YN16 418 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 CCDC190Q86UF4 302 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 LHFPL3Q86UP9 236 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR4K2Q8NGD2 314 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR13C4Q8NGS5 318 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TEX10Q9NXF1 929 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 PSORS1C1Q9UIG5 152 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 C2orf74A8MZ97 194 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 PDHXO00330 501 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 RLN2P04090 185 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 HLA-FP30511 346 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 HK3P52790 923 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 CTBP2P56545 445 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TAZQ16635 292 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 IRAK1BP1Q5VVH5 260 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 SLC16A13Q7RTY0 426 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 FAM46DQ8NEK8 389 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 PROKR1Q8TCW9 393 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 CHAC2Q8WUX2 184 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 LURAP1Q96LR2 239 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR4K3Q96R72 315 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 PIGVQ9NUD9 493 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 DSCR3O14972 297 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 HLA-DPB1P04440 258 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 EPORP19235 508 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 MBTPS1Q14703 1052 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR4D1Q15615 310 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 EXOC3L2Q2M3D2 409 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 NCEH1Q6PIU2 408 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 NLRC3Q7RTR2 1065 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR10Z1Q8NGY1 313 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 COLEC11Q9BWP8 271 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TMEM185BQ9H7F4 350 aa13.07□□□□□ -0.32
PPP4R3B-205ENST00000616288 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR6C75A6NL08 312 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 GFRA2O00451 464 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 SLC7A4O43246 635 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 NIPSNAP2O75323 286 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 LALBAP00709 142 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PKMP14618 531 aaKnown RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 ITGA3P26006 1051 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PSPHP78330 225 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 CNTN1Q12860 1018 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 RFTN2Q52LD8 501 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 C11orf96Q7Z7L8 435 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR9Q2Q8NGE9 314 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PRMT6Q96LA8 375 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF599Q96NL3 588 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 NTMT1Q9BV86 223 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 IFT27Q9BW83 186 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 TGIF2Q9GZN2 237 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 MYOZ2Q9NPC6 264 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 MIEF1Q9NQG6 463 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 LOC100509620A0A075B734 347 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 A0A1B0GVM2 712 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 ANKDD1BA6NHY2 528 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 I6L893 689 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 HAS3O00219 553 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 CD3GP09693 182 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 HAPLN1P10915 354 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 HAAOP46952 286 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 HMGCS2P54868 508 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms