RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 TRBV5-3A0A0A0MS03 114 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 NCR1O76036 304 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 F2P00734 622 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 SRCP12931 536 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 MAGEA2P43356 314 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 KIR2DL3P43628 341 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 RAB8AP61006 207 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 ACSM2AQ08AH3 577 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 IL18Q14116 193 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 UGT8Q16880 541 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 ACSM2BQ68CK6 577 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 NLGN4YQ8NFZ3 816 aaPredicted RBP12.65□□□□□ -0.38
MSH6-214ENST00000616033 SLC39A13Q96H72 371 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 TRIB3Q96RU7 358 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 WACQ9BTA9 647 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 GALNT9Q9HCQ5 603 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 CLN6Q9NWW5 311 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 FLRT1Q9NZU1 646 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 DOCK3Q8IZD9 2030 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 A0A0B4J293 547 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 B4DXG7 233 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 BTN3A3O00478 584 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 HIST1H2AGP0C0S8 130 aaPredicted RBP12.65□□□□□ -0.38
MSH6-214ENST00000616033 CYP2A6P11509 494 aaPredicted RBP12.65□□□□□ -0.38
MSH6-214ENST00000616033 HIST1H2ADP20671 130 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 MAGEA11P43364 429 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 ITGA1P56199 1179 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 OLR1P78380 273 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 IRF8Q02556 426 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 TIMM50Q3ZCQ8 353 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 CBLL1Q75N03 491 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 CPA6Q8N4T0 437 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 OR4A15Q8NGL6 344 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 PEX13Q92968 403 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 RNF31Q96EP0 1072 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 HIST1H2AHQ96KK5 128 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 C1orf74Q96LT6 269 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 TM9SF2Q99805 663 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 HIST1H2AJQ99878 128 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 H2AFJQ9BTM1 129 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 SORBS1Q9BX66 1292 aaKnown RBP12.65□□□□□ -0.38
MSH6-214ENST00000616033 BEX1Q9HBH7 125 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 ZNF304Q9HCX3 659 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 SLAMF7Q9NQ25 335 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 NDUFAF4Q9P032 175 aa12.65□□□□□ -0.38
MSH6-214ENST00000616033 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 POLR1CO15160 346 aaPredicted RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 POU3F3P20264 500 aaPredicted RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 SDC2P34741 201 aa12.65□□□□□ -0.39
MSH6-214ENST00000616033 RPS26P62854 115 aaKnown RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 ZNF177Q13360 481 aaPredicted RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 EIF4EBP2Q13542 120 aaPredicted RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 RFLNAQ6ZTI6 216 aa12.65□□□□□ -0.39
MSH6-214ENST00000616033 USP30Q70CQ3 517 aa12.65□□□□□ -0.39
MSH6-214ENST00000616033 RNF121Q9H920 327 aa12.65□□□□□ -0.39
MSH6-214ENST00000616033 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 SSR3Q9UNL2 185 aa12.65□□□□□ -0.39
MSH6-214ENST00000616033 CMAHPQ9Y471 501 aa12.65□□□□□ -0.39
MSH6-214ENST00000616033 SPIN1Q9Y657 262 aaPredicted RBP12.65□□□□□ -0.39
MSH6-214ENST00000616033 MGAT4DA6NG13 374 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 MYL12BO14950 172 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 B4GALT3O60512 393 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 PTPN6P29350 595 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 KCNJ10P78508 379 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 FAPQ12884 760 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 DUSP4Q13115 394 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 LRRC32Q14392 662 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 CHRNA6Q15825 494 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 CTXN3Q4LDR2 81 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 XKR6Q5GH73 641 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 ANKS3Q6ZW76 656 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 TCEANCQ8N8B7 351 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 SIMC1Q8NDZ2 872 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 DUSP26Q9BV47 211 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 TVP23BQ9NYZ1 205 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 CPNE7Q9UBL6 633 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 ZNF222Q9UK12 451 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 PADI3Q9ULW8 664 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 OR10H3O60404 316 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 ZNF780AO75290 641 aaPredicted RBP12.64□□□□□ -0.39
MSH6-214ENST00000616033 GADD45GO95257 159 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 GJB5O95377 273 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 EPOP01588 193 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
MSH6-214ENST00000616033 BCL2L1Q07817 233 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 WSCD2Q2TBF2 565 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 WDR53Q7Z5U6 358 aaPredicted RBP12.64□□□□□ -0.39
MSH6-214ENST00000616033 ZIC5Q96T25 663 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 HDHD2Q9H0R4 259 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 FAM83DQ9H4H8 585 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 SLA2Q9H6Q3 261 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 ALG5Q9Y673 324 aa12.64□□□□□ -0.39
MSH6-214ENST00000616033 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 CSF3P09919 207 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 EBLN1P0CF75 366 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 SRP54P61011 504 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms