RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 DHCR7Q9UBM7 475 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 NAALAD2Q9Y3Q0 740 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ADAMTS20P59510 1910 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 A0A0A6YYC8 382 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 A0A0G2JN53 185 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 GOLGA8QA0A0J9YX86 632 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 PMS2P1A4D2B8 440 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 GOLGA8OA6NCC3 632 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 GOLGA8NF8WBI6 632 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 I3L1I5 382 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 RTCAO00442 366 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 NVLO15381 856 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 FOXS1O43638 330 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 B3GALT2O43825 422 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 KIAA0754O94854 1291 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 KLHL18O94889 574 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 KLK1P06870 262 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 KLK3P07288 261 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 IL1RNP18510 177 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 HIST1H1TP22492 207 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 ATP5A1P25705 553 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 MAPK1P28482 360 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ARFIP2P53365 341 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 EMX2Q04743 252 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ABHD18Q0P651 414 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 KIAA0040Q15053 153 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 RFTN2Q52LD8 501 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 CCNYL2Q5T2Q4 361 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 CGB2Q6NT52 195 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 GALNT18Q6P9A2 607 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 CYP20A1Q6UW02 462 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ZCCHC7Q8N3Z6 543 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 ACOT4Q8N9L9 421 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 OR9A4Q8NGU2 314 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 MMABQ96EY8 250 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 RILPQ96NA2 401 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 LRFN5Q96NI6 719 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 SLC46A1Q96NT5 459 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 ELAC2Q9BQ52 826 aaKnown RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 CCDC28BQ9BUN5 200 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 NPLQ9BXD5 320 aaPredicted RBP13.95□□□□□ -0.18
CD48-203ENST00000613788 KCNK13Q9HB14 408 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 TCF7L2Q9NQB0 619 aa13.95□□□□□ -0.18
CD48-203ENST00000613788 C9orf172C9J069 976 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 C4orf51C9J302 202 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 SCELO95171 688 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 MED26O95402 600 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 PRR35P0CG20 571 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 PIM1P11309 404 aaPredicted RBP13.94□□□□□ -0.18
CD48-203ENST00000613788 AGXTP21549 392 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 ERVK-8P63133 956 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 RPL38P63173 70 aaKnown RBP13.94□□□□□ -0.18
CD48-203ENST00000613788 SLC9A5Q14940 896 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 OGFOD2Q6N063 350 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 NOXRED1Q6NXP6 359 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 IGF2-ASQ6U949 168 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 PRSS41Q7RTY9 318 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 SPATA21Q7Z572 469 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 SPATA19Q7Z5L4 167 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 SLC38A9Q8NBW4 561 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 PMEPA1Q969W9 287 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 C11orf24Q96F05 449 aaPredicted RBP13.94□□□□□ -0.18
CD48-203ENST00000613788 DPH2Q9BQC3 489 aaPredicted RBP13.94□□□□□ -0.18
CD48-203ENST00000613788 EBF4Q9BQW3 602 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 SORBS1Q9BX66 1292 aaKnown RBP13.94□□□□□ -0.18
CD48-203ENST00000613788 ZNF717Q9BY31 904 aaPredicted RBP13.94□□□□□ -0.18
CD48-203ENST00000613788 ZNF304Q9HCX3 659 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 LHX9Q9NQ69 397 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 MCM8Q9UJA3 840 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
CD48-203ENST00000613788 PCDHGA7Q9Y5G6 932 aa13.94□□□□□ -0.18
CD48-203ENST00000613788 KNTC1P50748 2209 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 GNG14A0A1W2PPG7 69 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 SGK494L7N484 410 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 MEN1O00255 615 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 PCDH7O60245 1069 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 GUCY1B2O75343 617 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 EEDO75530 441 aaKnown RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 STK17BO94768 372 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 B3GALT4O96024 378 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 ANXA4P09525 319 aaPredicted RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 ACPPP15309 386 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 PCSK2P16519 638 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 ZNF28P17035 718 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 TPP2P29144 1249 aaPredicted RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 TIA1P31483 386 aaKnown RBP eCLIP13.93□□□□□ -0.18
CD48-203ENST00000613788 GSTM5P46439 218 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 DCDP81605 110 aaKnown RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 SLAMF1Q13291 335 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 CAMK2BQ13554 666 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 RTP5Q14D33 572 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 LSM12Q3MHD2 195 aaKnown RBP13.93□□□□□ -0.18
CD48-203ENST00000613788 C1orf189Q5VU69 101 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 ZNF793Q6ZN11 406 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 PDSS2Q86YH6 399 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 COL26A1Q96A83 441 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 FCRL1Q96LA6 429 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 GBP5Q96PP8 586 aa13.93□□□□□ -0.18
CD48-203ENST00000613788 OR52B2Q96RD2 323 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms