RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RANGRFQ9HD47 186 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 NUP50Q9UKX7 468 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 SAMHD1Q9Y3Z3 626 aaKnown RBP21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 TICRRQ7Z2Z1 1910 aa21.09■□□□□ 0.97
POLR2J3-220ENST00000613744 CCDC182A6NF36 153 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 SEC14L5O43304 696 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 C9P02748 559 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 DNTTP04053 509 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 SLC2A4P14672 509 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 ITGB6P18564 788 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 SLAMF1Q13291 335 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 GAB4Q2WGN9 574 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 BRSK1Q8TDC3 778 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 VPS35Q96QK1 796 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 ABCB8Q9NUT2 735 aa21.08■□□□□ 0.97
POLR2J3-220ENST00000613744 A0A1W2PQ72 361 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 C12orf71A8MTZ7 269 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 EPOP01588 193 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 FMO4P31512 558 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 CD70P32970 193 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 GJA4P35212 333 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 ITKQ08881 620 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 SUZ12Q15022 739 aaKnown RBP21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 ITPRIPL2Q3MIP1 535 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 FBXO48Q5FWF7 155 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 SPANXN4Q5MJ08 99 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 UTS2BQ765I0 119 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 NATD1Q8N6N6 113 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 OR52B6Q8NGF0 335 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 CSGALNACT1Q8TDX6 532 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 CHFRQ96EP1 664 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 OR52E6Q96RD3 313 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 EPYCQ99645 322 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 MARK1Q9P0L2 795 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 V9GYH0 126 aa21.08■□□□□ 0.96
POLR2J3-220ENST00000613744 A0A0X1KG70 313 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 NCF1BA6NI72 391 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 NCF1CA8MVU1 366 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 VPS26AO75436 327 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 OTCP00480 354 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 EPHA2P29317 976 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 HLA-FP30511 346 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 HK3P52790 923 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 YBEYP58557 167 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 DSC2Q02487 901 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 PCDH1Q08174 1060 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 SERINC3Q13530 473 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 MPP7Q5T2T1 576 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 C10orf62Q5T681 223 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 LYPD8Q6UX82 237 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 PHACTR4Q8IZ21 702 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 SNAPC3Q92966 411 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 NXPE3Q969Y0 559 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 NECAB3Q96P71 396 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 MCCC1Q96RQ3 725 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 SRRQ9GZT4 340 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 KLHL20Q9Y2M5 609 aa21.07■□□□□ 0.96
POLR2J3-220ENST00000613744 NOS1APO75052 506 aaPredicted RBP21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 WDR47O94967 919 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 HOXB9P17482 250 aaPredicted RBP21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 CSKP41240 450 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 GZMKP49863 264 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 RPL38P63173 70 aaKnown RBP21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 LMAN2Q12907 356 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 CSTF3Q12996 717 aaKnown RBP21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 TDGQ13569 410 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 ERICH5Q6P6B1 374 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 TMPRSS11AQ6ZMR5 421 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 GDPGP1Q6ZNW5 385 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 SERPINA11Q86U17 422 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 DEPDC4Q8N2C3 294 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 STX19Q8N4C7 294 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 DENND6BQ8NEG7 585 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 UBE2FQ969M7 185 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 CITED4Q96RK1 184 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 GPR21Q99679 349 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 MAGEH1Q9H213 219 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 B3GNT2Q9NY97 397 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 ACTL7AQ9Y615 435 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 UBA6A0AVT1 1052 aaPredicted RBP21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 OR5K3A6NET4 321 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 CBX4O00257 560 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 TSPAN12O95859 305 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 SFTPA1Q8IWL2 248 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 FAM9CQ8IZT9 166 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 APCDD1Q8J025 514 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 OR4F6Q8NGB9 312 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 ASB15Q8WXK1 588 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 FRMD6Q96NE9 622 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 RNF167Q9H6Y7 350 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 ZNF556Q9HAH1 456 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 THUMPD1Q9NXG2 353 aaKnown RBP21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 NUFIP1Q9UHK0 495 aaKnown RBP21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 AP1M2Q9Y6Q5 423 aa21.06■□□□□ 0.96
POLR2J3-220ENST00000613744 COL4A3Q01955 1670 aa21.05■□□□□ 0.96
POLR2J3-220ENST00000613744 CDK2AP1O14519 115 aa21.05■□□□□ 0.96
POLR2J3-220ENST00000613744 ZNF682O95780 498 aa21.05■□□□□ 0.96
POLR2J3-220ENST00000613744 C1QBP02746 253 aa21.05■□□□□ 0.96
POLR2J3-220ENST00000613744 MYL9P24844 172 aa21.05■□□□□ 0.96
POLR2J3-220ENST00000613744 ALDH9A1P49189 494 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms