RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 SHDQ96IW2 340 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 RBP7Q96R05 134 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 WRAP73Q9P2S5 460 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 AURKAO14965 403 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 TLX2O43763 284 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 ACVRL1P37023 503 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 E2F1Q01094 437 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 LRRC66Q68CR7 880 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 SNX29P2Q8IUI4 249 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 ASCC1Q8N9N2 400 aaKnown RBP16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 ZSCAN4Q8NAM6 433 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 BIRC8Q96P09 236 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 TM9SF2Q99805 663 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 CCSER2Q9H7U1 834 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 VRTNQ9H8Y1 702 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 TTC34A8MYJ7 566 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 RPS3P23396 243 aaKnown RBP eCLIP16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 GLT8D1Q68CQ7 371 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 JAGN1Q8N5M9 183 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 C7orf43Q8WVR3 580 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 FAM83CQ9BQN1 747 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 PELOQ9BRX2 385 aaKnown RBP16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 YIPF4Q9BSR8 244 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 MYNNQ9NPC7 610 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 PCDHB3Q9Y5E6 796 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 CLDN7O95471 211 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 CHRNA1P02708 482 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 CD47Q08722 323 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 POU4F2Q12837 409 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 ALG10Q5BKT4 473 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 SPANXN4Q5MJ08 99 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 HFE2Q6ZVN8 426 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 FKBP10Q96AY3 582 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 TWNKQ96RR1 684 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 SLC2A6Q9UGQ3 507 aa16.82■□□□□ 0.28
HMGXB3-206ENST00000613459 A0A0J9YVX5 310 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 PCDHGA12O60330 932 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 AFF1P51825 1210 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 GNG2P59768 71 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 RPS13P62277 151 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 RAB7BQ96AH8 199 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 CD93Q9NPY3 652 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 LIPT1Q9Y234 373 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 MUSKO15146 869 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 MT-ND2P03891 347 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 LEPRP48357 1165 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 NUDT6P53370 316 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 COQ5Q5HYK3 327 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 NRROSQ86YC3 692 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 ZNF366Q8N895 744 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 ORAI3Q9BRQ5 295 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 OR51I1Q9H343 314 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 MAGIXQ9H6Y5 334 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 FPGSQ05932 587 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 CRHR2Q13324 411 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 TBRG1Q3YBR2 411 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 MMAAQ8IVH4 418 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 PQLC3Q8N755 202 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 SMPDL3BQ92485 455 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 G6PC3Q9BUM1 346 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 PTGES2Q9H7Z7 377 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 PPM1BO75688 479 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 OXSR1O95747 527 aaPredicted RBP16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 JUNP05412 331 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 GKN3PP0CG01 181 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 MAN2A2P49641 1150 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 ZNF423Q2M1K9 1284 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 PIM3Q86V86 326 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 CHERPQ8IWX8 916 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 FCAMRQ8WWV6 532 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 DHRS1Q96LJ7 313 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 CMKLR1Q99788 373 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 GNG8Q9UK08 70 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 WDR45Q9Y484 360 aa16.81■□□□□ 0.28
HMGXB3-206ENST00000613459 A6NHS1 94 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TMEM233B4DJY2 109 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 VEGFDO43915 354 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 RASAL1O95294 804 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 GSRP00390 522 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 GABARAPL2P60520 117 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 RING1Q06587 406 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 GPM6BQ13491 265 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 IRF5Q13568 498 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 CLCA4Q14CN2 919 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 GPRC6AQ5T6X5 926 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 GPAT4Q86UL3 456 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 ZFAND4Q86XD8 727 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TICAM1Q8IUC6 712 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TCEAL4Q96EI5 215 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 HSPA12BQ96MM6 686 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 ACTR6Q9GZN1 396 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 KCNIP3Q9Y2W7 256 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 OARD1Q9Y530 152 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 C6orf47O95873 294 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TBX18O95935 607 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 ZNF8P17098 575 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 P4HA3Q7Z4N8 544 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 PHTF2Q8N3S3 785 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TMEM234Q8WY98 164 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 CAPNS2Q96L46 248 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms