RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 H7BY64 318 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF197O14709 1029 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 HOXC11O43248 304 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TNFRSF21O75509 655 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 FGF19O95750 216 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 HSD3B1P14060 373 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 HSD3B2P26439 372 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 C21orf33P30042 268 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRIM2P49643 509 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC35A2P78381 396 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 SPIBQ01892 262 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 UAP1L1Q3KQV9 507 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TMEM236Q5W0B7 351 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TNFAIP8L2Q6P589 184 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ENTHD1Q8IYW4 607 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 MIPOL1Q8TD10 442 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 FBLIM1Q8WUP2 373 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PROX1Q92786 737 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 FGF13Q92913 245 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 RAB8BQ92930 207 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 NRBF2Q96F24 287 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRAP1Q96NZ9 151 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 DOHHQ9BU89 302 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 MBNL1Q9NR56 388 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 RAD18Q9NS91 495 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 BLOC1S6Q9UL45 172 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 RAB23Q9ULC3 237 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PLEKHM1Q9Y4G2 1056 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 LYVE1Q9Y5Y7 322 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TNFRSF11BO00300 401 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 RNASET2O00584 256 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PCDH17O14917 1159 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PRKRAO75569 313 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 C9P02748 559 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 HOXB3P14651 431 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PCGF2P35227 344 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 GABARAPL2P60520 117 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 NCS1P62166 190 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 VEZF1Q14119 521 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ELAVL3Q14576 367 aaKnown RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 EXOC3L2Q2M3D2 409 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ADPRMQ3LIE5 342 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ANXA8L1Q5VT79 327 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 KIAA1614Q5VZ46 1190 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 EGFLAMQ63HQ2 1017 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 FAM71E1Q6IPT2 247 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TMIGD1Q6UXZ0 262 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 LAS2Q8IYD9 372 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF557Q8N988 423 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 FNDC8Q8TC99 324 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 RAB2BQ8WUD1 216 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 TFGQ92734 400 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 CHFRQ96EP1 664 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 MAGEB10Q96LZ2 347 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 CXorf36Q9H7Y0 433 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 ADPRHL2Q9NX46 363 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 PCDHGA6Q9Y5G7 932 aa13.47□□□□□ -0.25
PCDHGA3-202ENST00000612467 SNRNP200O75643 2136 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 CARNS1A5YM72 827 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 PLPP1O14494 284 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 UGT2B11O75310 529 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 JRKO75564 520 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 FUCA1P04066 466 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 SERPIND1P05546 499 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 CA3P07451 260 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 OPRL1P41146 370 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 IDH2P48735 452 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 C21orf58P58505 322 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 SELENOWP63302 87 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 ATP1A4Q13733 1029 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZC3H12BQ5HYM0 836 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 TANGO2Q6ICL3 276 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 ERN2Q76MJ5 926 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 CCDC103Q8IW40 242 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 KLHDC8AQ8IYD2 350 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 PGBD3Q8N328 593 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 OR2L2Q8NH16 312 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 JPH3Q8WXH2 748 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 WFDC6Q9BQY6 131 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 EFCAB11Q9BUY7 163 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 DYRK4Q9NR20 520 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 C1GALT1Q9NS00 363 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 ZNF282Q9UDV7 671 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 ATP6V1HQ9UI12 483 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 ENPP5Q9UJA9 477 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 RNF6Q9Y252 685 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 WDR37Q9Y2I8 494 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 SLC27A6Q9Y2P4 619 aa13.46□□□□□ -0.25
PCDHGA3-202ENST00000612467 EDDM13A0A1B0GTR0 161 aa13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 A0A1W2PRB8 838 aa13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 PCDH8O95206 1070 aa13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 DUSP7Q16829 419 aa13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 SYT16Q17RD7 645 aa13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 RFX4Q33E94 735 aa13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.26
PCDHGA3-202ENST00000612467 FAHD1Q6P587 224 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms