RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 GPAMQ9HCL2 828 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 MOCS1Q9NZB8 636 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 A8MUA0 341 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 FCHO1O14526 889 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 SEC31AO94979 1220 aaKnown RBP16.61■□□□□ 0.25
SSBP1-215ENST00000612337 CLDN14O95500 239 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 SNRPB2P08579 225 aaKnown RBP16.61■□□□□ 0.25
SSBP1-215ENST00000612337 ABOP16442 354 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 GNAZP19086 355 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 TAS2R39P59534 338 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 TERF2Q15554 542 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 FRA10AC1Q70Z53 315 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 ADAMTSL2Q86TH1 951 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 ANKMY2Q8IV38 441 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 CHERPQ8IWX8 916 aaKnown RBP16.61■□□□□ 0.25
SSBP1-215ENST00000612337 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSBP1-215ENST00000612337 KLHDC8AQ8IYD2 350 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 POGLUT1Q8NBL1 392 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 APCDD1LQ8NCL9 501 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 B3GNT7Q8NFL0 401 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 TTLQ8NG68 377 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 GAL3ST3Q96A11 431 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
SSBP1-215ENST00000612337 CTNNAL1Q9UBT7 734 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 POLQO75417 2590 aa16.61■□□□□ 0.25
SSBP1-215ENST00000612337 H2AFYO75367 372 aaKnown RBP16.6■□□□□ 0.25
SSBP1-215ENST00000612337 WDR47O94967 919 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 C1GALT1C1LP0DN25 315 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 SLC6A12P48065 614 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 CLCN2P51788 898 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 BTN3A2P78410 334 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 HSF1Q00613 529 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 TSNQ15631 228 aaKnown RBP16.6■□□□□ 0.25
SSBP1-215ENST00000612337 TMIGD1Q6UXZ0 262 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 SLCO4C1Q6ZQN7 724 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 SCUBE1Q8IWY4 988 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 FBXO36Q8NEA4 188 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 AGAP11Q8TF27 550 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 PHF10Q8WUB8 498 aaKnown RBP16.6■□□□□ 0.25
SSBP1-215ENST00000612337 ANKRD49Q8WVL7 239 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 RHBDF1Q96CC6 855 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 MTFMTQ96DP5 389 aaKnown RBP16.6■□□□□ 0.25
SSBP1-215ENST00000612337 VPS39Q96JC1 886 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 SEC16BQ96JE7 1060 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 FAR2Q96K12 515 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 CAPZA3Q96KX2 299 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 PHF12Q96QT6 1004 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 NPLQ9BXD5 320 aaPredicted RBP16.6■□□□□ 0.25
SSBP1-215ENST00000612337 POPDC3Q9HBV1 291 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 NSMCE4AQ9NXX6 385 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 KLF13Q9Y2Y9 288 aaPredicted RBP16.6■□□□□ 0.25
SSBP1-215ENST00000612337 ASB1Q9Y576 335 aa16.6■□□□□ 0.25
SSBP1-215ENST00000612337 CCDC168Q8NDH2 2452 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 TRBV11-1A0A0K0K1C0 115 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 E7ESA3 106 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 TP73O15350 636 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 ZNHIT1O43257 154 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 MYO1DO94832 1006 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 GSTM2P28161 218 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 GDF5P43026 501 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 MEOX1P50221 254 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 PDIA2Q13087 525 aaKnown RBP16.59■□□□□ 0.25
SSBP1-215ENST00000612337 FASTKD3Q14CZ7 662 aaKnown RBP16.59■□□□□ 0.25
SSBP1-215ENST00000612337 CDSNQ15517 529 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 C18orf21Q32NC0 220 aaPredicted RBP16.59■□□□□ 0.25
SSBP1-215ENST00000612337 DOLPP1Q86YN1 238 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 CREG2Q8IUH2 290 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 CEP97Q8IW35 865 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 MS4A6EQ96DS6 147 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 MCMBPQ9BTE3 642 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 TRIM8Q9BZR9 551 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 PITHD1Q9GZP4 211 aaPredicted RBP16.59■□□□□ 0.25
SSBP1-215ENST00000612337 RHOJQ9H4E5 214 aa16.59■□□□□ 0.25
SSBP1-215ENST00000612337 PPIEQ9UNP9 301 aaKnown RBP16.59■□□□□ 0.25
SSBP1-215ENST00000612337 LRIT2A6NDA9 550 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 E9PLN8 166 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 KLRC4-KLRK1H3BQV0 150 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 PRRG2O14669 202 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 ERI3O43414 337 aaKnown RBP16.58■□□□□ 0.24
SSBP1-215ENST00000612337 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.24
SSBP1-215ENST00000612337 HSD17B7P56937 341 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 ILF2Q12905 390 aaKnown RBP16.58■□□□□ 0.24
SSBP1-215ENST00000612337 CBLBQ13191 982 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 RUNX2Q13950 521 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 SLBPQ14493 270 aaKnown RBP eCLIP16.58■□□□□ 0.24
SSBP1-215ENST00000612337 FGD2Q7Z6J4 655 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 SULF2Q8IWU5 870 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 EID3Q8N140 333 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 CYP4Z2PQ8N1L4 340 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 KRT78Q8N1N4 520 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 VMP1Q96GC9 406 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 LURAP1Q96LR2 239 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 DMRTA2Q96SC8 542 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 VKORC1Q9BQB6 163 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 CAPS2Q9BXY5 557 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 DERL2Q9GZP9 239 aa16.58■□□□□ 0.24
SSBP1-215ENST00000612337 NT5DC2Q9H857 520 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms