RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 TRAM1L1Q8N609 369 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 HORMAD2Q8N7B1 307 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 SLC35F5Q8WV83 523 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 NODALQ96S42 347 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 GSTM3P21266 225 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 SMSP52788 366 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 PLGLAQ15195 96 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 TPRG1LQ5T0D9 272 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 AMBNQ9NP70 447 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 ATE1O95260 518 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 ETS2P15036 469 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 EPHA4P54764 986 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 RPL19P84098 196 aaKnown RBP13.88□□□□□ -0.19
SYNRG-217ENST00000612223 LAS2Q8IYD9 372 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 OR8K3Q8NH51 312 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 ZNF285Q96NJ3 590 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 RDH8Q9NYR8 311 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 TCRBV7S3A2A0A539 114 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 GSRP00390 522 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 H2BFMP0C1H6 154 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 EXOC3L2Q2M3D2 409 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 SLC2A7Q6PXP3 512 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 MARCH9Q86YJ5 346 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 NLE1Q9NVX2 485 aaPredicted RBP13.88□□□□□ -0.19
SYNRG-217ENST00000612223 MS4A12Q9NXJ0 267 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 DNAJB9Q9UBS3 223 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 ADAM18Q9Y3Q7 739 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 MRC1P22897 1456 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 FABP12A6NFH5 140 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 GNG2P59768 71 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 RABEPKQ7Z6M1 372 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 HMGN2P46Q86SG4 172 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 REXO2Q9Y3B8 237 aaKnown RBP13.88□□□□□ -0.19
SYNRG-217ENST00000612223 A8MT66 165 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 TIGD6Q17RP2 521 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 CLEC1AQ8NC01 280 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■■■ 34.4
SYNRG-217ENST00000612223 ACOT12Q8WYK0 555 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 SLC7A6OSQ96CW6 309 aaPredicted RBP13.88□□□□□ -0.19
SYNRG-217ENST00000612223 SLC17A9Q9BYT1 436 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 C12orf4Q9NQ89 552 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 FNIP2Q9P278 1114 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 ADGRB1O14514 1584 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 C6P13671 934 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 ZNF662Q6ZS27 426 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 P2RY8Q86VZ1 359 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 SLC29A3Q9BZD2 475 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 CD244Q9BZW8 370 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 MVB12BQ9H7P6 319 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 TELO2Q9Y4R8 837 aa13.88□□□□□ -0.19
SYNRG-217ENST00000612223 M0QX08 132 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 HBQ1P09105 142 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 ANXA8P13928 327 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 TNFAIP8L3Q5GJ75 292 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 ZNF550Q7Z398 422 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 FANK1Q8TC84 345 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 AIFM2Q9BRQ8 373 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 PIGRP01833 764 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 STK11Q15831 433 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 PLEKHS1Q5SXH7 462 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 UNQ6126/PRO20091Q6UXV3 157 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 TSSK6Q9BXA6 273 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 S100A6P06703 90 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 PVALBP20472 110 aaPredicted RBP13.87□□□□□ -0.19
SYNRG-217ENST00000612223 BTBD16Q32M84 506 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 SERINC5Q86VE9 423 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 PDE10AQ9Y233 779 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 METTL21EPA6NDL7 271 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 SOX14O95416 240 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 RPLP0P05388 317 aaKnown RBP13.87□□□□□ -0.19
SYNRG-217ENST00000612223 QPCTQ16769 361 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 OGFOD2Q6N063 350 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 HPS1Q92902 700 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 SCGB3A2Q96PL1 93 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 GGT3PA6NGU5 568 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 CLPXO76031 633 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 GNRHRP30968 328 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 WDR6Q9NNW5 1121 aaKnown RBP13.87□□□□□ -0.19
SYNRG-217ENST00000612223 MED1Q15648 1581 aaPredicted RBP13.87□□□□□ -0.19
SYNRG-217ENST00000612223 MRPL3P09001 348 aaKnown RBP13.87□□□□□ -0.19
SYNRG-217ENST00000612223 MAN2A2P49641 1150 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 PAMR1Q6UXH9 720 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 GALNT11Q8NCW6 608 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 ALPK1Q96QP1 1244 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 DPH7Q9BTV6 452 aa13.87□□□□□ -0.19
SYNRG-217ENST00000612223 TIMM8BQ9Y5J9 83 aaPredicted RBP13.87□□□□□ -0.19
SYNRG-217ENST00000612223 ISPDA4D126 451 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 MATN2O00339 956 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 RNH1P13489 461 aaKnown RBP13.86□□□□□ -0.19
SYNRG-217ENST00000612223 MERTKQ12866 999 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 ELAVL3Q14576 367 aaKnown RBP13.86□□□□□ -0.19
SYNRG-217ENST00000612223 HERC3Q15034 1050 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 CPNE8Q86YQ8 564 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 CILP2Q8IUL8 1156 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 NUP43Q8NFH3 380 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 OR4K1Q8NGD4 311 aa13.86□□□□□ -0.19
SYNRG-217ENST00000612223 OR51I1Q9H343 314 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms