RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	METTL2A	Q96IZ6	378 aa	Known RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	AMBRA1	Q9C0C7	1298 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	LMAN1L	Q9HAT1	526 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	TMEM165	Q9HC07	324 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	MBNL1	Q9NR56	388 aa	Known RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	SAMD4A	Q9UPU9	718 aa	Known RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	ORC6	Q9Y5N6	252 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	COL4A2	P08572	1712 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	C17orf113	A0A1B0GUU1	675 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	GPR89A	B7ZAQ6	455 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614		H0YIV9	168 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	CLIC1	O00299	241 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLC1A7	O00341	560 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLC31A1	O15431	190 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	SCN2B	O60939	215 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	POP7	O75817	140 aa	Known RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	MYO1D	O94832	1006 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	EIF2S1	P05198	315 aa	Known RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	GPR89B	P0CG08	455 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	ITGAM	P11215	1152 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	HSD3B1	P14060	373 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	COX7A2	P14406	83 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	PCMT1	P22061	227 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	HSD3B2	P26439	372 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	GRK3	P35626	688 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	PREP	P48147	710 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	TPMT	P51580	245 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	WNT3	P56703	355 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	C21orf58	P58505	322 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLC14A1	Q13336	389 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	UBXN2B	Q14CS0	331 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	MEP1A	Q16819	746 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	CCDC92	Q53HC0	331 aa	Predicted RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZNF691	Q5VV52	312 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	HIPK1	Q86Z02	1210 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR8J2	Q8NGG1	315 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	SLC35B4	Q969S0	331 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	MED8	Q96G25	268 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	PANX1	Q96RD7	426 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	MTERF1	Q99551	399 aa	Known RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	ARMC7	Q9H6L4	198 aa		13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	FAM120C	Q9NX05	1096 aa	Known RBP	13.32	□□□□□ -0.28
COPS7B-223	ENST00000611614	LOC100130705	A0A1B0GUX0	176 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	SHISA7	A6NL88	538 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	HS6ST1	O60243	411 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	MRPS14	O60783	128 aa	Known RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	NTRK1	P04629	796 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	CHRNB1	P11230	501 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ENG	P17813	658 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	GABRG2	P18507	467 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	MAGEA2	P43356	314 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	BDKRB1	P46663	353 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ACSM2A	Q08AH3	577 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	KCNAB2	Q13303	367 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	DDX39B	Q13838	428 aa	Known RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	CTF1	Q16619	201 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	DGUOK	Q16854	277 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	CTU2	Q2VPK5	515 aa	Known RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	CCSMST1	Q4G0I0	132 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ACSM2B	Q68CK6	577 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	LRRTM4	Q86VH4	590 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	AMZ2	Q86W34	360 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	SETD9	Q8NE22	299 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR56A3	Q8NH54	315 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	LINC00615	Q96LM1	132 aa	Predicted RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	TEX101	Q9BY14	249 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	BRF2	Q9HAW0	419 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ANKH	Q9HCJ1	492 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	FBXO8	Q9NRD0	319 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	AASDHPPT	Q9NRN7	309 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR1A2	Q9Y585	309 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	MGAT4D	A6NG13	374 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614		M0QX08	132 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	EPN2	O95208	641 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	TRIM23	P36406	574 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	HPCAL1	P37235	193 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	EIF2B2	P49770	351 aa	Known RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	GP2	P55259	537 aa	Known RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ISL1	P61371	349 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	VMAC	Q2NL98	169 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	AGAP7P	Q5VUJ5	663 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ANKRD34A	Q69YU3	496 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ERICH5	Q6P6B1	374 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614		Q6ZS52	159 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	SYT13	Q7L8C5	426 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZDHHC21	Q8IVQ6	265 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	ZZZ3	Q8IYH5	903 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	SCAI	Q8N9R8	606 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	STARD8	Q92502	1023 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	FOXJ1	Q92949	421 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	TBC1D20	Q96BZ9	403 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	OR4K3	Q96R72	315 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	NELL2	Q99435	816 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	PKP4	Q99569	1192 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	TRIT1	Q9H3H1	467 aa	Known RBP	13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	SGK2	Q9HBY8	427 aa		13.31	□□□□□ -0.28
COPS7B-223	ENST00000611614	WNT16	Q9UBV4	365 aa		13.31	□□□□□ -0.28

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