RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 NEIL2Q969S2 332 aa19.58■□□□□ 0.72
SSBP3-216ENST00000610401 CDK5RAP1Q96SZ6 601 aaKnown RBP19.58■□□□□ 0.72
SSBP3-216ENST00000610401 GABARAPL1Q9H0R8 117 aa19.58■□□□□ 0.72
SSBP3-216ENST00000610401 PNCKQ6P2M8 343 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 OR7G3Q8NG95 312 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 OR2AP1Q8NGE2 309 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 COL21A1Q96P44 957 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 OR51B4Q9Y5P0 310 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 AOC2O75106 756 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 NME6O75414 186 aaPredicted RBP19.57■□□□□ 0.72
SSBP3-216ENST00000610401 AP2A2O94973 939 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 GABRR2P28476 465 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 TAS2R50P59544 299 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 TUBA1BP68363 451 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 IFI44LQ53G44 452 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 SNAP47Q5SQN1 464 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 TUBA1AQ71U36 451 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 LRRC70Q7Z2Q7 622 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 OR52E4Q8NGH9 312 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 OR9Q1Q8NGQ5 310 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 TXNDC15Q96J42 360 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 SLC30A2Q9BRI3 323 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 SP140LQ9H930 580 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 STARD7Q9NQZ5 370 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 CARD8Q9Y2G2 431 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 PCDHGA2Q9Y5H1 932 aa19.57■□□□□ 0.72
SSBP3-216ENST00000610401 H7C4K7 107 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 OR10H3O60404 316 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ZNF821O75541 412 aaPredicted RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 RAE1P78406 368 aaKnown RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TBCEQ15813 527 aaPredicted RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 CDKN3Q16667 212 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 THOC7Q6I9Y2 204 aaKnown RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ALG14Q96F25 216 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 DEPDC7Q96QD5 511 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 NUFIP1Q9UHK0 495 aaKnown RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ITM2BQ9Y287 266 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TRPM7Q96QT4 1865 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TRBV4-1A0A0J9YWV2 114 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TRBC2A0A5B9 178 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TMEM189-UBE2V1I3L0A0 370 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 FADDQ13158 208 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TBRG1Q3YBR2 411 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ZFP69Q49AA0 526 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ERICH5Q6P6B1 374 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 USP45Q70EL2 814 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 IL17RDQ8NFM7 739 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 CYB5D2Q8WUJ1 264 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 CEP295NLQ96MC4 621 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 SDHCQ99643 169 aaPredicted RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 RIOK2Q9BVS4 552 aaKnown RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 SUV39H2Q9H5I1 410 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 RUVBL1Q9Y265 456 aaKnown RBP19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ANKDD1BA6NHY2 528 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ADAMDEC1O15204 470 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 CHMP24386 653 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TLE2Q04725 743 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 SSX1Q16384 188 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 DCAF4L2Q8NA75 395 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 WFDC6Q9BQY6 131 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 ABCG4Q9H172 646 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 RDH14Q9HBH5 336 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 TAS2R9Q9NYW1 312 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 AP3M1Q9Y2T2 418 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 HSPE1-MOB4S4R3N1 261 aa19.56■□□□□ 0.72
SSBP3-216ENST00000610401 C1SP09871 688 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 SRCP12931 536 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 IDSP22304 550 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 VEPH1Q14D04 833 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 BCL2A1Q16548 175 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 MICAQ29983 383 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 PAMR1Q6UXH9 720 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 TPRG1Q6ZUI0 275 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 CACUL1Q86Y37 369 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 IL17FQ96PD4 163 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 WRAP53Q9BUR4 548 aaKnown RBP19.55■□□□□ 0.72
SSBP3-216ENST00000610401 SAGE2PA6NJ88 616 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 WASHC1A8K0Z3 465 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 ALPPL2P10696 532 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 SLC6A12P48065 614 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 CDC42P60953 191 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 CDK6Q00534 326 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 GPR33Q49SQ1 333 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 FAM131AQ6UXB0 335 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 WASH2PQ6VEQ5 465 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 HSD11B1LQ7Z5J1 315 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 RNF180Q86T96 592 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 TCEANCQ8N8B7 351 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 TMEM159Q96B96 161 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 TMEM246Q9BRR3 403 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 VN1R3Q9BXE9 311 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 BARHL1Q9BZE3 327 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 FAM120CQ9NX05 1096 aaKnown RBP19.55■□□□□ 0.72
SSBP3-216ENST00000610401 RNF186Q9NXI6 227 aa19.55■□□□□ 0.72
SSBP3-216ENST00000610401 TRBV5-4A0A0C4DH59 114 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 SLC35F4A4IF30 521 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 H3BQ06 376 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-216ENST00000610401 INPPL1O15357 1258 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 CCNB2O95067 398 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 BRAT1Q6PJG6 821 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms