RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 GTPBP10A4D1E9 387 aaKnown RBP3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 GLTPD2A6NH11 291 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 NPIPB9F8W1W9 429 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 RNF224P0DH78 156 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 ATP6V1B1P15313 513 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 C4BPBP20851 252 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 GIFP27352 417 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 SERPINH1P50454 418 aaKnown RBP3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 BTG1P62324 171 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 TEFQ10587 303 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 SLC39A12Q504Y0 691 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 KIF6Q6ZMV9 814 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 EGFL6Q8IUX8 553 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 SLC22A15Q8IZD6 547 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 LPCAT1Q8NF37 534 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 NUP37Q8NFH4 326 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 RPLP0P6Q8NHW5 317 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 NSMCE3Q96MG7 304 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 ACPTQ9BZG2 426 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 NAPBQ9H115 298 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 AKIRIN1Q9H9L7 192 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 C3orf14Q9HBI5 128 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 FBXW2Q9UKT8 454 aa3.65□□□□□ -1.83
SMCHD1-213ENST00000609587 MYH14Q7Z406 1995 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 TCP10L2B9ZVM9 353 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 CACNB4O00305 520 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 RTN2O75298 545 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 HMMRO75330 724 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 ZSCAN5DPP0CG00 497 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 CPA3P15088 417 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 MYOGP15173 224 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 PDHA2P29803 388 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 FEN1P39748 380 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 CASP3P42574 277 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 CLCN4P51793 760 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 ERVK11-1P61568 191 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 IRX1P78414 480 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 DHODHQ02127 395 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 CNTN1Q12860 1018 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 CEACAM7Q14002 265 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 RPS6KA1Q15418 735 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 FAM189A2Q15884 450 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 IFI44LQ53G44 452 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 SPANXN4Q5MJ08 99 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 ZC2HC1BQ5TFG8 222 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 PRAMEF8Q5VWM4 474 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF776Q68DI1 518 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 KCTD11Q693B1 232 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM65Q6PJ69 517 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 FRRS1Q6ZNA5 592 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 RFPL4BQ6ZWI9 263 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 ASPGQ86U10 573 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 TMEM126BQ8IUX1 230 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF444Q8N0Y2 327 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 THEM5Q8N1Q8 247 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 SPC24Q8NBT2 197 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 OR13C5Q8NGS8 318 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 PSMA8Q8TAA3 256 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 KRT35Q92764 455 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 CCDC47Q96A33 483 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 BPIFA2Q96DR5 249 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 POM121L2Q96KW2 1035 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 LINC00479Q96M42 142 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 OVOL2Q9BRP0 275 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 UBAC1Q9BSL1 405 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 PAPOLGQ9BWT3 736 aaKnown RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 FGFBP2Q9BYJ0 223 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 OSBPL8Q9BZF1 889 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 PNPLA3Q9NST1 481 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 TEX10Q9NXF1 929 aaPredicted RBP3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 TMCC3Q9ULS5 477 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF510Q9Y2H8 683 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 WIPI2Q9Y4P8 454 aa3.64□□□□□ -1.83
SMCHD1-213ENST00000609587 KPNA7A9QM74 516 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 SIGLEC5O15389 551 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 ECE2O60344 883 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 KINO60870 393 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 LRCH4O75427 683 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 AKAP3O75969 853 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 RPLP0P05388 317 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 GPR183P32249 361 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 HNF4AP41235 474 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 ADARP55265 1226 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 GSCP56915 257 aaPredicted RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 KIAA1024LP59773 190 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 BPIFB3P59826 476 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 NECTIN1Q15223 517 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 SGCBQ16585 318 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 C2orf76Q3KRA6 126 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 AARDQ4LEZ3 155 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 Q6ZVQ6 151 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 RAPH1Q70E73 1250 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 LRRTM1Q86UE6 522 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 LAX1Q8IWV1 398 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 DND1Q8IYX4 353 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 SLC43A2Q8N370 569 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 ARL6IP6Q8N6S5 226 aa3.63□□□□□ -1.83
SMCHD1-213ENST00000609587 CD99L2Q8TCZ2 262 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms