RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 ORC5O43913 435 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 GDF9O60383 454 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CLIC3O95833 236 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 LGI1O95970 557 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 EGFP01133 1207 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 TNNC2P02585 160 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 F11P03951 625 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CDK1P06493 297 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 C2P06681 752 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 APRTP07741 180 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 H2AFB1P0C5Y9 115 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 H2AFB2P0C5Z0 115 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 SMIM6P0DI80 62 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 HNRNPLP14866 589 aaKnown RBP eCLIP4.89□□□□□ -1.63
SSX9-202ENST00000608568 CTPS1P17812 591 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 MYL12AP19105 171 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ITGALP20701 1170 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ALAS2P22557 587 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 SLC6A2P23975 617 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ATP5F1P24539 256 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 LMO2P25791 158 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 IL1R2P27930 398 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CD68P34810 354 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 NUP62P37198 522 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 RFX2P48378 723 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ARHGDIAP52565 204 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 BCAT1P54687 386 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ATP12AP54707 1039 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 EPHB3P54753 998 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CDH8P55286 799 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 RRAS2P62070 204 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 NCS1P62166 190 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 RPP38P78345 283 aaKnown RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 CYP24A1Q07973 514 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZNF252P-AS1Q0IIN9 211 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 SPEM2Q0P670 501 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 DBPQ10586 325 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 ABRQ12979 859 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CUL2Q13617 745 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CCINQ13939 588 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZNF267Q14586 743 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 GPR19Q15760 415 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZNF77Q15935 545 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CARTPTQ16568 116 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 SOWAHAQ2M3V2 549 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 KIF19Q2TAC6 998 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZNF528Q3MIS6 628 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZACNQ401N2 412 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 GTDC1Q4AE62 458 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ATP13A4Q4VNC1 1196 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 RPS26P11Q5JNZ5 115 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 NXNL2Q5VZ03 156 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 LRRC66Q68CR7 880 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ARHGAP17Q68EM7 881 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 TXNDC8Q6A555 127 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 PM20D1Q6GTS8 502 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 TRMT10BQ6PF06 316 aaKnown RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 PLET1Q6UQ28 207 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 TREML4Q6UXN2 200 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZNF852Q6ZMS4 543 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 USP45Q70EL2 814 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 PGAP1Q75T13 922 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZNF534Q76KX8 674 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 RTL10Q7L3V2 364 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CHST15Q7LFX5 561 aaPredicted RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 SLC46A3Q7Z3Q1 461 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 SPATA19Q7Z5L4 167 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZBTB46Q86UZ6 589 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZC3HC1Q86WB0 502 aaKnown RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 TRIM69Q86WT6 500 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 NKAIN4Q8IVV8 208 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 TMEM151BQ8IW70 566 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 GPD1LQ8N335 351 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 MIER2Q8N344 545 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 C9orf62Q8N4C0 152 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ZNF366Q8N895 744 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 OR4M2Q8NGB6 313 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 OR4M1Q8NGD0 313 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 OR4D10Q8NGI6 311 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 OR52H1Q8NGJ2 320 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 BTN2A2Q8WVV5 523 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 PMM1Q92871 262 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 HGDQ93099 445 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 WBP2Q969T9 261 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 TMBIM1Q969X1 311 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 MYLPFQ96A32 169 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 KIAA1191Q96A73 305 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CREB3L1Q96BA8 519 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 PTERQ96BW5 349 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 BIRC7Q96CA5 298 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 REPS1Q96D71 796 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 MTERF3Q96E29 417 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 MFSD3Q96ES6 412 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 CERS2Q96G23 380 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 ART5Q96L15 291 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 RNF145Q96MT1 663 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 MCEEQ96PE7 176 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 RBM14Q96PK6 669 aaKnown RBP4.89□□□□□ -1.63
SSX9-202ENST00000608568 SORCS2Q96PQ0 1159 aa4.89□□□□□ -1.63
SSX9-202ENST00000608568 RNF157Q96PX1 679 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms