RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 IGHV3-16A0A0C4DH30 117 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 A0A1W2PNU3 283 aaPredicted RBP3.35□□□□□ -1.87
HDDC2-207ENST00000608532 TSPY2A6NKD2 308 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 TXNL1O43396 289 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 MOCS2O96007 188 aaPredicted RBP3.35□□□□□ -1.87
HDDC2-207ENST00000608532 QDPRP09417 244 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 DLATP10515 647 aaKnown RBP3.35□□□□□ -1.87
HDDC2-207ENST00000608532 PTAFRP25105 342 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 SLC1A3P43003 542 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 SLC1A4P43007 532 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 OR3A3P47888 321 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 NPY4RP50391 375 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 RAD23AP54725 363 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 NUCB1Q02818 461 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 PPA1Q15181 289 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 RNLSQ5VYX0 342 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 NCOA7Q8NI08 942 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 KIAA1524Q8TCG1 905 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 SIPA1Q96FS4 1042 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 SERAC1Q96JX3 654 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 MGME1Q9BQP7 344 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 OR10A4Q9H209 315 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 SP140LQ9H930 580 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 PFDN4Q9NQP4 134 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 DEPPQ9NTK1 212 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 PDRG1Q9NUG6 133 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 MRGBPQ9NV56 204 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 ZNF581Q9P0T4 197 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 ANAPC5Q9UJX4 755 aa3.35□□□□□ -1.87
HDDC2-207ENST00000608532 ZNF346Q9UL40 294 aaKnown RBP3.35□□□□□ -1.87
HDDC2-207ENST00000608532 FCGR3BO75015 233 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 CALCAP01258 141 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 THY1P04216 161 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 FAM200BP0CF97 657 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 DUX4L4P0CJ87 422 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 RPL9P32969 192 aaKnown RBP3.34□□□□□ -1.87
HDDC2-207ENST00000608532 PRELPP51888 382 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 CRYBA2P53672 197 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 PTENP60484 403 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 CNTN1Q12860 1018 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 SLC27A4Q6P1M0 643 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 C17orf107Q6ZR85 190 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 PHLDB2Q86SQ0 1253 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 HIPK1Q86Z02 1210 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 BANPQ8N9N5 519 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 ITLN1Q8WWA0 313 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 EXOC4Q96A65 974 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 TSSK2Q96PF2 358 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 FERMT1Q9BQL6 677 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 MTIF3Q9H2K0 278 aaKnown RBP3.34□□□□□ -1.87
HDDC2-207ENST00000608532 MARCH7Q9H992 704 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 B4GALT7Q9UBV7 327 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 MGAT4AQ9UM21 535 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 SH3GLB1Q9Y371 365 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 PCDHGA1Q9Y5H4 931 aa3.34□□□□□ -1.87
HDDC2-207ENST00000608532 ZNF732B4DXR9 585 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 CCDC188H7C350 402 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 EIF5BO60841 1220 aaKnown RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 GBAP04062 536 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 ANKRD34CP0C6C1 535 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 PRKCIP41743 596 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 MATKP42679 507 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 ABRQ12979 859 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 RUNX3Q13761 415 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 ZNF506Q5JVG8 444 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 MUC21Q5SSG8 566 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 ATAD3CQ5T2N8 411 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 FAM91A1Q658Y4 838 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 TMEM182Q6ZP80 229 aaPredicted RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 RFPL4BQ6ZWI9 263 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 OR8H2Q8N162 312 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 CARNMT1Q8N4J0 409 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 Q8NFD4 153 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 SMPDL3AQ92484 453 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 BSCL2Q96G97 398 aaPredicted RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 CNOT6LQ96LI5 555 aaKnown RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 ANKRD27Q96NW4 1050 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 ALKBH3Q96Q83 286 aaPredicted RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 UBQLN3Q9H347 655 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 FNDC4Q9H6D8 234 aaPredicted RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 UBE2TQ9NPD8 197 aaPredicted RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 TNFRSF19Q9NS68 423 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 CHCHD3Q9NX63 227 aaKnown RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 NOCTQ9UK39 431 aaKnown RBP3.33□□□□□ -1.88
HDDC2-207ENST00000608532 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 SALL1Q9NSC2 1324 aa3.33□□□□□ -1.88
HDDC2-207ENST00000608532 LOC390937A0A1W2PQ73 354 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 ARHGEF37A1IGU5 675 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 IGLON5A6NGN9 336 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 B4GAT1O43505 415 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 ANGPTL1O95841 491 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 RPN1P04843 607 aaKnown RBP3.32□□□□□ -1.88
HDDC2-207ENST00000608532 ELK3P41970 407 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 CAPZA1P52907 286 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 RBBP4Q09028 425 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 CYLC2Q14093 348 aaPredicted RBP3.32□□□□□ -1.88
HDDC2-207ENST00000608532 SHEQ5VZ18 495 aa3.32□□□□□ -1.88
HDDC2-207ENST00000608532 BAIAP2L2Q6UXY1 529 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms