RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CSNK1G3Q9Y6M4 447 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 CROCCQ5TZA2 2017 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 DNAH14Q0VDD8 3507 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 LILRA5A6NI73 299 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 CPSF4O95639 269 aaKnown RBP20.55■□□□□ 0.88
USP6NL-204ENST00000606752 DDCP20711 480 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 TSFMP43897 325 aaKnown RBP20.55■□□□□ 0.88
USP6NL-204ENST00000606752 RHDQ02161 417 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 FXNQ16595 210 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 TRIM40Q6P9F5 258 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 CYP2R1Q6VVX0 501 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 ZNF793Q6ZN11 406 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 ZNF621Q6ZSS3 439 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 ZNF438Q7Z4V0 828 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 RSRC1Q96IZ7 334 aaKnown RBP20.55■□□□□ 0.88
USP6NL-204ENST00000606752 SLC38A3Q99624 504 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 ZFYVE21Q9BQ24 234 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 TRIM15Q9C019 465 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 KLHL25Q9H0H3 589 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 PIF1Q9H611 641 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 PCDHB3Q9Y5E6 796 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 SNX13Q9Y5W8 968 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 SNX11Q9Y5W9 270 aa20.55■□□□□ 0.88
USP6NL-204ENST00000606752 A0A0G2JN53 185 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 A0A0J9YVX5 310 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 TMEM221A6NGB7 291 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 H3BNX3 289 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 M0R296 226 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 TBX19O60806 448 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 BAG2O95816 211 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 C8BP07358 591 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 PVRP15151 417 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 TGM3Q08188 693 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 PLK5Q496M5 336 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 C14orf28Q4W4Y0 310 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 LCN8Q6JVE9 175 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 TICAM1Q8IUC6 712 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 AMER3Q8N944 861 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 OR10A6Q8NH74 314 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 AURKBQ96GD4 344 aaPredicted RBP20.54■□□□□ 0.88
USP6NL-204ENST00000606752 PHF12Q96QT6 1004 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 KAT8Q9H7Z6 458 aaKnown RBP20.54■□□□□ 0.88
USP6NL-204ENST00000606752 TMEM74BQ9NUR3 256 aa20.54■□□□□ 0.88
USP6NL-204ENST00000606752 TCRBV3S1A0A5B6 114 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 NVLO15381 856 aaKnown RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 GPR37L1O60883 481 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 SLC35G6P0C7Q6 338 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 ZCCHC18P0CG32 403 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 DDX5P17844 614 aaKnown RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 EFNA1P20827 205 aaPredicted RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 HIST1H1TP22492 207 aaPredicted RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 GCKP35557 465 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 SESN3P58005 492 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 PPP1CAP62136 330 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 SLC9A5Q14940 896 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 MUM1Q2TAK8 710 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 AASDHQ4L235 1098 aaPredicted RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 SEMA6CQ9H3T2 930 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 SUSD2Q9UGT4 822 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 PILRBQ9UKJ0 227 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 AQP12BA6NM10 295 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 C4orf51C9J302 202 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 ARPC2O15144 300 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 FAM58BPP0C7Q3 252 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 ATP5A1P25705 553 aaKnown RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 RXRGP48443 463 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 PTDSS1P48651 473 aaKnown RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 OR4D2P58180 307 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 BNIP3Q12983 259 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 MPEG1Q2M385 716 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 PROSER1Q86XN7 944 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 AQP12AQ8IXF9 295 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 MMP21Q8N119 569 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 ZCCHC7Q8N3Z6 543 aaKnown RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 SLC25A45Q8N413 288 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 NATD1Q8N6N6 113 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 ACOT4Q8N9L9 421 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 FAM47BQ8NA70 645 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 KCT2Q8NC54 265 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 CAMKVQ8NCB2 501 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 GAL3ST3Q96A11 431 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 ELF4Q99607 663 aaPredicted RBP20.53■□□□□ 0.88
USP6NL-204ENST00000606752 ABCG4Q9H172 646 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 PCDHGB4Q9UN71 923 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 USP22Q9UPT9 525 aa20.53■□□□□ 0.88
USP6NL-204ENST00000606752 EVPLLA8MZ36 301 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 CLIC1O00299 241 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 HRO43593 1189 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 PRAMEF10O60809 474 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 EPN2O95208 641 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 PROS1P07225 676 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 ATP6V1B2P21281 511 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 ARRB1P49407 418 aaPredicted RBP20.52■□□□□ 0.88
USP6NL-204ENST00000606752 BNC1Q01954 994 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 SLAMF1Q13291 335 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 SPPL2CQ8IUH8 684 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 TNIP2Q8NFZ5 429 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 OR2T12Q8NG77 320 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 OR8K5Q8NH50 307 aa20.52■□□□□ 0.88
USP6NL-204ENST00000606752 GOT1L1Q8NHS2 421 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms