RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 HEATR5BQ9P2D3 2071 aa14.28□□□□□ -0.12
NEDD8-MDP1-204ENST00000605847 FN1P02751 2386 aaKnown RBP14.27□□□□□ -0.12
NEDD8-MDP1-204ENST00000605847 SCN3AQ9NY46 2000 aa14.27□□□□□ -0.12
NEDD8-MDP1-204ENST00000605847 TRGV5A0A0B4J1U4 118 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CEP104O60308 925 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 DNAJB6O75190 326 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AVILO75366 819 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 VAPBO95292 243 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 IFNB1P01574 187 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 APRTP07741 180 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 STIP1P31948 543 aaKnown RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SKIV2L2P42285 1042 aaKnown RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ADARP55265 1226 aaKnown RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SESN2P58004 480 aaPredicted RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 RGS1Q08116 209 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TERF2Q15554 542 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PHKG1Q16816 387 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 UBE2R2Q712K3 238 aaPredicted RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CIARTQ8N365 385 aaPredicted RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 AFAP1L2Q8N4X5 818 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TBC1D19Q8N5T2 526 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PRELID2Q8N945 189 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 LINC01560Q8TB33 94 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ASB11Q8WXH4 323 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 NCLNQ969V3 563 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 Q96MF0 132 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TCF12Q99081 682 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 LIN28AQ9H9Z2 209 aaKnown RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 RAB6BQ9NRW1 208 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TREX1Q9NSU2 369 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 TFR2Q9UP52 801 aa14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HRNRQ86YZ3 2850 aaPredicted RBP14.27□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 IGKV3D-11A0A0A0MRZ8 115 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 A0A0G2JMM0 328 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 A0A1W2PPB8 328 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 A0A1W2PRS3 328 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 KIR3DP1A8MWS1 328 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 GOLGA8KD6RF30 607 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 GOLGA8TH3BQL2 631 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CBFA2T2O43439 604 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 OR1F1O43749 312 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 HCN1O60741 890 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SMPD2O60906 423 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 OR6B1O95007 311 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 B3GALT4O96024 378 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CELA3AP09093 270 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZNF888P0CJ79 500 aaPredicted RBP14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 MPC1LP0DKB6 136 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CDH1P12830 882 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 RNH1P13489 461 aaKnown RBP14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 NMBRP28336 390 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SOX3P41225 446 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CRADDP78560 199 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PWP1Q13610 501 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CUL1Q13616 776 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SPA17Q15506 151 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZNF750Q32MQ0 723 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 FBXL19-AS1Q494R0 122 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CATSPEREQ5SY80 951 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 C16orf47Q6ZP98 133 aaPredicted RBP14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 RTL4Q6ZR62 310 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 MAATS1Q7Z4T9 603 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 FBXW8Q8N3Y1 598 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SLC35B2Q8TB61 432 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ALG3Q92685 438 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 IL22Q9GZX6 179 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CLK4Q9HAZ1 481 aaKnown RBP14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SACM1LQ9NTJ5 587 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZNF629Q9UEG4 869 aaPredicted RBP14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ADAM21Q9UKJ8 722 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 VPS9D1Q9Y2B5 631 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PCDHA13Q9Y5I0 950 aa14.26□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 JMJD1CQ15652 2540 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 URADA6NGE7 173 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 GFYI3L273 518 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 WWP2O00308 870 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 P04436 131 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ENO3P13929 434 aaPredicted RBP14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 POU4F3Q15319 338 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CAPN12Q6ZSI9 719 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ULK2Q8IYT8 1036 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 LRRC75A-AS1Q8N1F1 130 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZNF592Q92610 1267 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PDLIM2Q96JY6 352 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 RASL10BQ96S79 203 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 CCDC68Q9H2F9 335 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 BFARQ9NZS9 450 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 MYOTQ9UBF9 498 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 ZNF223Q9UK11 482 aaPredicted RBP14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SH2B3Q9UQQ2 575 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PCDHGB3Q9Y5G1 929 aa14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.25□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 FBN1P35555 2871 aaKnown RBP14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 RNF212BA8MTL3 300 aa14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 PRKNO60260 465 aaPredicted RBP14.24□□□□□ -0.13
NEDD8-MDP1-204ENST00000605847 IL2RAP01589 272 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms