RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MYO1DO94832 1006 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 WDR47O94967 919 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 C1GALT1C1LP0DN25 315 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 PTGER1P34995 402 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 GDF5P43026 501 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 KIR3DL1P43629 444 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 MEOX1P50221 254 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 CLCN2P51788 898 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 ARL4CP56559 192 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 STXBP1P61764 594 aaKnown RBP12.29□□□□□ -0.44
RPS28-204ENST00000602140 CDKL1Q00532 357 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 MGAT5Q09328 741 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 C18orf21Q32NC0 220 aaPredicted RBP12.29□□□□□ -0.44
RPS28-204ENST00000602140 FGD2Q7Z6J4 655 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 ZC3HC1Q86WB0 502 aaKnown RBP12.29□□□□□ -0.44
RPS28-204ENST00000602140 KLHL7Q8IXQ5 586 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPS28-204ENST00000602140 ZNF295-AS1Q8N0V1 137 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 ARMC10Q8N2F6 343 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 APCDD1LQ8NCL9 501 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 B3GNT7Q8NFL0 401 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 ANKRD7Q92527 254 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 PDLIM2Q96JY6 352 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 FAR2Q96K12 515 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 PNO1Q9NRX1 252 aaKnown RBP12.29□□□□□ -0.44
RPS28-204ENST00000602140 TRMT1Q9NXH9 659 aaKnown RBP12.29□□□□□ -0.44
RPS28-204ENST00000602140 KLF13Q9Y2Y9 288 aaPredicted RBP12.29□□□□□ -0.44
RPS28-204ENST00000602140 OARD1Q9Y530 152 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 ASB1Q9Y576 335 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 NCOA6Q14686 2063 aaPredicted RBP12.29□□□□□ -0.44
RPS28-204ENST00000602140 E9PLN8 166 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 KLRC4-KLRK1H3BQV0 150 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 ADAM10O14672 748 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 TFECO14948 347 aaPredicted RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 ZSCAN12O43309 604 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 H2AFYO75367 372 aaKnown RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 TCP1P17987 556 aaKnown RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 GNAZP19086 355 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 HNRNPH1P31943 449 aaKnown RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 RFC3P40938 356 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 HNMTP50135 292 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 TAS2R39P59534 338 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 DR1Q01658 176 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 RUNX2Q13950 521 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 SLBPQ14493 270 aaKnown RBP eCLIP12.28□□□□□ -0.44
RPS28-204ENST00000602140 TSNQ15631 228 aaKnown RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 TMIGD1Q6UXZ0 262 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 SLCO4C1Q6ZQN7 724 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 SYDE1Q6ZW31 735 aaPredicted RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 FRA10AC1Q70Z53 315 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 SULF2Q8IWU5 870 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 CYP4Z2PQ8N1L4 340 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 TMEM156Q8N614 296 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 POGLUT1Q8NBL1 392 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 PHF10Q8WUB8 498 aaKnown RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 ANKRD49Q8WVL7 239 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 CCT6BQ92526 530 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 GAL3ST3Q96A11 431 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 DMRTA2Q96SC8 542 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 VKORC1Q9BQB6 163 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 PRTFDC1Q9NRG1 225 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 CTNNAL1Q9UBT7 734 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 FBXW2Q9UKT8 454 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 PPT2Q9UMR5 302 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 MMACHCQ9Y4U1 282 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 TEP1Q99973 2627 aaKnown RBP12.28□□□□□ -0.44
RPS28-204ENST00000602140 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 ADGRG4Q8IZF6 3080 aa12.28□□□□□ -0.44
RPS28-204ENST00000602140 A0A1B0GTH9 108 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 LRIT2A6NDA9 550 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 TGFBR3LH3BV60 316 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 ERI3O43414 337 aaKnown RBP12.27□□□□□ -0.45
RPS28-204ENST00000602140 PEX1O43933 1283 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 HS6ST1O60243 411 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 CDC40O60508 579 aaKnown RBP eCLIP12.27□□□□□ -0.45
RPS28-204ENST00000602140 ITGA10O75578 1167 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 PPP2R1BP30154 601 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 PTGS2P35354 604 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 SLC6A12P48065 614 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 GPR85P60893 370 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 PDIA2Q13087 525 aaKnown RBP12.27□□□□□ -0.45
RPS28-204ENST00000602140 FASTKD3Q14CZ7 662 aaKnown RBP12.27□□□□□ -0.45
RPS28-204ENST00000602140 TERF2Q15554 542 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 MDGA2Q7Z553 956 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 ADAMTSL2Q86TH1 951 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 CEP97Q8IW35 865 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 SCUBE1Q8IWY4 988 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 KLHDC8AQ8IYD2 350 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 EID3Q8N140 333 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 TMEM52Q8NDY8 209 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 FBXO36Q8NEA4 188 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 TTLQ8NG68 377 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 CA5BP1Q8WTZ4 195 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 NCLNQ969V3 563 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 SDCCAG3Q96C92 435 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 RHBDF1Q96CC6 855 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 MS4A6EQ96DS6 147 aa12.27□□□□□ -0.45
RPS28-204ENST00000602140 VMP1Q96GC9 406 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms