RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 IL3P08700 152 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 ENGP17813 658 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 ZNF10P21506 573 aaPredicted RBP17.12■□□□□ 0.33
VRK3-225ENST00000601912 MTTPP55157 894 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 RAB8AP61006 207 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 SUZ12Q15022 739 aaKnown RBP17.12■□□□□ 0.33
VRK3-225ENST00000601912 ANXA8L1Q5VT79 327 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 OR4F3Q6IEY1 312 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 PGM2L1Q6PCE3 622 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 ABHD13Q7L211 337 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 ARPINQ7Z6K5 226 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 MCATQ8IVS2 390 aaKnown RBP17.12■□□□□ 0.33
VRK3-225ENST00000601912 ZCCHC7Q8N3Z6 543 aaKnown RBP17.12■□□□□ 0.33
VRK3-225ENST00000601912 CSNK1A1LQ8N752 337 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 ACOT4Q8N9L9 421 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 GTF2H4Q92759 462 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 PPCDCQ96CD2 204 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 TM4SF18Q96CE8 201 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 COQ8BQ96D53 544 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 GPATCH1Q9BRR8 931 aaKnown RBP17.12■□□□□ 0.33
VRK3-225ENST00000601912 SLC39A3Q9BRY0 314 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 KCNH6Q9H252 994 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 FAM60AQ9NP50 221 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 C11orf16Q9NQ32 467 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 CPED1A4D0V7 1026 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 FXYD1O00168 92 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 KIF1CO43896 1103 aaKnown RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 SRPX2O60687 465 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 PDE5AO76074 875 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 ZBTB11O95625 1053 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 FURINP09958 794 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 ZNF888P0CJ79 500 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 LAMP1P11279 417 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 PIM1P11309 404 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 ATP5A1P25705 553 aaKnown RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 MLLT3P42568 568 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 VSX2P58304 361 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 PHC1P78364 1004 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 BTN3A2P78410 334 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 PLIN5Q00G26 463 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 KLC1Q07866 573 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 LRRC74AQ0VAA2 488 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 CAPRIN1Q14444 709 aaKnown RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 CCDC6Q16204 474 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 WDR74Q6RFH5 385 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 ZNF793Q6ZN11 406 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 SPRED1Q7Z699 444 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 OR8K5Q8NH50 307 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 UTP15Q8TED0 518 aaKnown RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 NAT6Q93015 286 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 FAIM2Q9BWQ8 316 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 BHLHE41Q9C0J9 482 aaPredicted RBP17.11■□□□□ 0.33
VRK3-225ENST00000601912 CHRNA10Q9GZZ6 450 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 PDE7BQ9NP56 450 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 SOHLH2Q9NX45 425 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 SLC7A8Q9UHI5 535 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 MAN2B2Q9Y2E5 1009 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 PCDH15Q96QU1 1955 aa17.11■□□□□ 0.33
VRK3-225ENST00000601912 P2RX6O15547 441 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 TMPRSS11DO60235 418 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 ERN1O75460 977 aaKnown RBP17.1■□□□□ 0.33
VRK3-225ENST00000601912 FAM58BPP0C7Q3 252 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 DDCP20711 480 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 CD1CP29017 333 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SLC7A2P52569 658 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 MC1RQ01726 317 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SLAMF1Q13291 335 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 PDE7AQ13946 482 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 PIGGQ5H8A4 983 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SAMD4BQ5PRF9 694 aaKnown RBP17.1■□□□□ 0.33
VRK3-225ENST00000601912 ANKRD26P1Q6NSI1 321 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 DLEU7Q6UYE1 221 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 USP53Q70EK8 1073 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 DNAJC22Q8N4W6 341 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 DNAJB14Q8TBM8 379 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SMOC1Q9H4F8 434 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SLAMF8Q9P0V8 285 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 TMEM181Q9P2C4 612 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 KLHL3Q9UH77 587 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 EXO1Q9UQ84 846 aaKnown RBP17.1■□□□□ 0.33
VRK3-225ENST00000601912 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 LAMA1P25391 3075 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 IGHV5-51A0A0C4DH38 117 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 PRSS51A0A1B0GVH4 220 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 EME2A4GXA9 379 aaPredicted RBP17.1■□□□□ 0.33
VRK3-225ENST00000601912 RFXANKO14593 260 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SH3BP5O60239 455 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SCELO95171 688 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 ANP32DO95626 131 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 C9P02748 559 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 ME2P23368 584 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 SLC6A2P23975 617 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 ARL4DP49703 201 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 C1orf146Q5VVC0 180 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 LAIR1Q6GTX8 287 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 GUSBP11Q6P575 273 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 NET1Q7Z628 596 aaPredicted RBP17.1■□□□□ 0.33
VRK3-225ENST00000601912 ANKRD46Q86W74 232 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 HPS6Q86YV9 775 aa17.1■□□□□ 0.33
VRK3-225ENST00000601912 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms