RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	HMGCS1	Q01581	520 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	HYAL2	Q12891	473 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	CLN3	Q13286	438 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	VWA5B1	Q5TIE3	1220 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	TMEM214	Q6NUQ4	689 aa	Known RBP	20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	ACAD11	Q709F0	780 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	MAVS	Q7Z434	540 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	METTL27	Q8N6F8	245 aa	Predicted RBP	20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	SRFBP1	Q8NEF9	429 aa	Known RBP	20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	RFWD2	Q8NHY2	731 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	ZCCHC10	Q8TBK6	192 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	PPP3R2	Q96LZ3	170 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	ELAC2	Q9BQ52	826 aa	Known RBP	20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	SLC6A16	Q9GZN6	736 aa		20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	20.84	■□□□□ 0.93
LTBP4-227	ENST00000600026		A0A1B0GX78	115 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	LRIT2	A6NDA9	550 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	SDHD	O14521	159 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	SEMA3D	O95025	777 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	KLK3	P07288	261 aa	Predicted RBP	20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	CCNYL3	P0C7X3	344 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	ITGAX	P20702	1163 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	ALAS2	P22557	587 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	ARFIP2	P53365	341 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	NDUFA9	Q16795	377 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	SLC9B1	Q4ZJI4	515 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	ATP6AP1L	Q52LC2	224 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	NXN	Q6DKJ4	435 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026		Q6ZSR9	355 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	SPATA21	Q7Z572	469 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	PROSER1	Q86XN7	944 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	MR1	Q95460	341 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	GAL3ST3	Q96A11	431 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	RGMA	Q96B86	450 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	METTL2A	Q96IZ6	378 aa	Known RBP	20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	C3orf30	Q96M34	536 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	F2RL3	Q96RI0	385 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	CCT8L2	Q96SF2	557 aa		20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	REXO4	Q9GZR2	422 aa	Known RBP	20.83	■□□□□ 0.93
LTBP4-227	ENST00000600026	SCN3A	Q9NY46	2000 aa		20.83	■□□□□ 0.92
LTBP4-227	ENST00000600026	GOLGA8Q	A0A0J9YX86	632 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ATP6AP2	A0A1C7CYW4	349 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	GOLGA8O	A6NCC3	632 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	NPIPB8	E9PQR5	432 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	GOLGA8N	F8WBI6	632 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	TAF4	O00268	1085 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	SEC22B	O75396	215 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ATP6AP2	O75787	350 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	TBX6	O95947	436 aa	Predicted RBP	20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	FAM107A	O95990	144 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	PRPH2	P23942	346 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	EPHA3	P29320	983 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	STAT5A	P42229	794 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	IDH3A	P50213	366 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ABHD18	Q0P651	414 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ADPRM	Q3LIE5	342 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	GALNTL6	Q49A17	601 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	LCN10	Q6JVE6	187 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	TRIM40	Q6P9F5	258 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	FAM199X	Q6PEV8	388 aa	Predicted RBP	20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ZNF517	Q6ZMY9	492 aa	Predicted RBP	20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ABHD13	Q7L211	337 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	IL22RA1	Q8N6P7	574 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	KDF1	Q8NAX2	398 aa	Predicted RBP	20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	OR2L5	Q8NG80	312 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	OR2T11	Q8NH01	316 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	CEP70	Q8NHQ1	597 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ACTRT2	Q8TDY3	377 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	STON2	Q8WXE9	905 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	MAEL	Q96JY0	434 aa	Known RBP	20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	CCDC28B	Q9BUN5	200 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	TMEM120A	Q9BXJ8	343 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	AICDA	Q9GZX7	198 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	RABEP2	Q9H5N1	569 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	WDR55	Q9H6Y2	383 aa	Predicted RBP	20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	LRTM1	Q9HBL6	345 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	C1orf109	Q9NX04	203 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	PADI1	Q9ULC6	663 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	ZMIZ1	Q9ULJ6	1067 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	RAX	Q9Y2V3	346 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	CCL27	Q9Y4X3	112 aa		20.82	■□□□□ 0.92
LTBP4-227	ENST00000600026	AHCTF1	Q8WYP5	2266 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	ERI3	O43414	337 aa	Known RBP	20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	FOXS1	O43638	330 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	PEX11A	O75192	247 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	MYO1D	O94832	1006 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	ETHE1	O95571	254 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	AGXT	P21549	392 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	HNRNPH1	P31943	449 aa	Known RBP	20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	EIF2S3	P41091	472 aa	Known RBP	20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	ARFIP1	P53367	373 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	ACSM2A	Q08AH3	577 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	SF3A3	Q12874	501 aa	Known RBP eCLIP	20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	MAD2L1	Q13257	205 aa	Predicted RBP	20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	FAM53B	Q14153	422 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	AP5B1	Q2VPB7	878 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	SPIN4	Q56A73	249 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	ACSM2B	Q68CK6	577 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	FAM198B	Q6UWH4	519 aa		20.81	■□□□□ 0.92
LTBP4-227	ENST00000600026	CT55	Q8WUE5	264 aa		20.81	■□□□□ 0.92

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms