RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 KLHL1Q9NR64 748 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 SLC22A14Q9Y267 594 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 KCNE2Q9Y6J6 123 aa17.59■□□□□ 0.41
PNKP-213ENST00000599543 HMX2A2RU54 273 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 GABRR3A8MPY1 467 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 PRSS44E7EML9 344 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 PSMD12O00232 456 aaPredicted RBP17.58■□□□□ 0.4
PNKP-213ENST00000599543 RIPK2O43353 540 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 PRMT3O60678 531 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 MLYCDO95822 493 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 CD46P15529 392 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 STMN1P16949 149 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 EEF1DP29692 281 aaKnown RBP17.58■□□□□ 0.4
PNKP-213ENST00000599543 CD96P40200 585 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 HNF4AP41235 474 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 HNMTP50135 292 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 SLC26A5P58743 744 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 OC90Q02509 493 aaPredicted RBP17.58■□□□□ 0.4
PNKP-213ENST00000599543 NAA30Q147X3 362 aaPredicted RBP17.58■□□□□ 0.4
PNKP-213ENST00000599543 RBBP5Q15291 538 aaKnown RBP17.58■□□□□ 0.4
PNKP-213ENST00000599543 RAPH1Q70E73 1250 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 LGI4Q8N135 537 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 HORMAD2Q8N7B1 307 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 ANKRD53Q8N9V6 530 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 TMEM178AQ8NBL3 297 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 UTP15Q8TED0 518 aaKnown RBP17.58■□□□□ 0.4
PNKP-213ENST00000599543 ANKRD7Q92527 254 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 TSPAN17Q96FV3 270 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 PTCHD1Q96NR3 888 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 PAFAH2Q99487 392 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 NPAS2Q99743 824 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 EPB41L4BQ9H329 900 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 SH3BGRL2Q9UJC5 107 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 ENTPD4Q9Y227 616 aa17.58■□□□□ 0.4
PNKP-213ENST00000599543 A0A087WUV0 522 aaPredicted RBP17.57■□□□□ 0.4
PNKP-213ENST00000599543 ARHGAP10A1A4S6 786 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 FAM227AF5H4B4 570 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 CCL21O00585 134 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 HNRNPRO43390 633 aaKnown RBP17.57■□□□□ 0.4
PNKP-213ENST00000599543 MAN1A2O60476 641 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 DNAJB6O75190 326 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 WISP3O95389 354 aaPredicted RBP17.57■□□□□ 0.4
PNKP-213ENST00000599543 CCDC166P0CW27 439 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 CA7P43166 264 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 ST13P50502 369 aaKnown RBP17.57■□□□□ 0.4
PNKP-213ENST00000599543 CASP6P55212 293 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 RAB8AP61006 207 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 RAB10P61026 200 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 CDKL1Q00532 357 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 IRF9Q00978 393 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 TSNQ15631 228 aaKnown RBP17.57■□□□□ 0.4
PNKP-213ENST00000599543 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 SPINK14Q6IE38 97 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 MTFR2Q6P444 385 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 NXPE4Q6UWF7 544 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 QSOX2Q6ZRP7 698 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 ADAMTSL2Q86TH1 951 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 TICAM1Q8IUC6 712 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 CYP4X1Q8N118 509 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 MARVELD3Q96A59 401 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 FUT8Q9BYC5 575 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 HES7Q9BYE0 225 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 SLC6A16Q9GZN6 736 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 CLK4Q9HAZ1 481 aaKnown RBP17.57■□□□□ 0.4
PNKP-213ENST00000599543 OARD1Q9Y530 152 aa17.57■□□□□ 0.4
PNKP-213ENST00000599543 GTF3C1Q12789 2109 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 SLC19A2O60779 497 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 SERPINA6P08185 405 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 INHBAP08476 426 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 RNH1P13489 461 aaKnown RBP17.56■□□□□ 0.4
PNKP-213ENST00000599543 DLG1Q12959 904 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 SLC29A2Q14542 456 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 ZKSCAN8Q15776 578 aaPredicted RBP17.56■□□□□ 0.4
PNKP-213ENST00000599543 TRMT10CQ7L0Y3 403 aaKnown RBP17.56■□□□□ 0.4
PNKP-213ENST00000599543 FAM98AQ8NCA5 519 aaKnown RBP17.56■□□□□ 0.4
PNKP-213ENST00000599543 ARMC2Q8NEN0 867 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 ELP5Q8TE02 316 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 UBLCP1Q8WVY7 318 aaPredicted RBP17.56■□□□□ 0.4
PNKP-213ENST00000599543 SLC44A1Q8WWI5 657 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 SCMH1Q96GD3 660 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 CCDC120Q96HB5 630 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 RHBGQ9H310 441 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 CDCP1Q9H5V8 836 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 CTNNAL1Q9UBT7 734 aa17.56■□□□□ 0.4
PNKP-213ENST00000599543 APCP25054 2843 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 EXOC1LA0A1B0GW35 172 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 SAGE2PA6NJ88 616 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 ENO4A6NNW6 628 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 WDR47O94967 919 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 SLC35E2BP0CK96 405 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 GNAZP19086 355 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 MAOAP21397 527 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 TNFRSF8P28908 595 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 MSH2P43246 934 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 BTG2P78543 158 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 ALDH6A1Q02252 535 aaKnown RBP17.55■□□□□ 0.4
PNKP-213ENST00000599543 HYAL2Q12891 473 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 C18orf21Q32NC0 220 aaPredicted RBP17.55■□□□□ 0.4
PNKP-213ENST00000599543 TOR1AIP1Q5JTV8 583 aa17.55■□□□□ 0.4
PNKP-213ENST00000599543 RPS19BP1Q86WX3 136 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms