RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 USP27XA6NNY8 438 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 ACOT7O00154 380 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 B3GALT2O43825 422 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 TFEBP19484 476 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 SAT1P21673 171 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 HNF4AP41235 474 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 SSR4P51571 173 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 NCOA6Q14686 2063 aaPredicted RBP16.32■□□□□ 0.2
HOMER3-210ENST00000599097 ARHGAP11AQ6P4F7 1023 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 TRIM40Q6P9F5 258 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 TMIGD1Q6UXZ0 262 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 OTOGQ6ZRI0 2925 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 CEP97Q8IW35 865 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 ZNF595Q8IYB9 648 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 CPSF7Q8N684 471 aaKnown RBP16.32■□□□□ 0.2
HOMER3-210ENST00000599097 ANKRD53Q8N9V6 530 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 ASB5Q8WWX0 329 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 C14orf79Q96F83 325 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 TSPAN17Q96FV3 270 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 PDLIM2Q96JY6 352 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 TRIM8Q9BZR9 551 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 ROGDIQ9GZN7 287 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 DDX47Q9H0S4 455 aaKnown RBP16.32■□□□□ 0.2
HOMER3-210ENST00000599097 RHBGQ9H310 441 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 COPS7BQ9H9Q2 264 aaPredicted RBP16.32■□□□□ 0.2
HOMER3-210ENST00000599097 SLC24A3Q9HC58 644 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 GPRC5BQ9NZH0 403 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 TXNDC16Q9P2K2 825 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 FBXW2Q9UKT8 454 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 PPT2Q9UMR5 302 aa16.32■□□□□ 0.2
HOMER3-210ENST00000599097 YARS2Q9Y2Z4 477 aaKnown RBP16.32■□□□□ 0.2
HOMER3-210ENST00000599097 PCNX1Q96RV3 2341 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 FAM95CA0A1B0GW59 222 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 ANKDD1BA6NHY2 528 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 MAN1A2O60476 641 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 MYO1DO94832 1006 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 WDR47O94967 919 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 TUBB4AP04350 444 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 SNRPB2P08579 225 aaKnown RBP16.31■□□□□ 0.2
HOMER3-210ENST00000599097 C1GALT1C1LP0DN25 315 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 PTGS2P35354 604 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 MEOX1P50221 254 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 DR1Q01658 176 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 SLC13A2Q13183 592 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 EFTUD2Q15029 972 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■■■ 31.4
HOMER3-210ENST00000599097 MSS51Q4VC12 460 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 CDKL4Q5MAI5 379 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 RGS9BPQ6ZS82 235 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 CA13Q8N1Q1 262 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 TMEM132CQ8N3T6 1108 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 FAM57AQ8TBR7 257 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 CCT6BQ92526 530 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 EHD1Q9H4M9 534 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 NT5DC2Q9H857 520 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 ADAP2Q9NPF8 381 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 PPIEQ9UNP9 301 aaKnown RBP16.31■□□□□ 0.2
HOMER3-210ENST00000599097 ERVK-11Q9UQG0 969 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 TEX264Q9Y6I9 313 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 SPACA6W5XKT8 324 aa16.31■□□□□ 0.2
HOMER3-210ENST00000599097 NPEPPSL1A6NEC2 478 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 FOXO6A8MYZ6 492 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 CLGNO14967 610 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 ERI3O43414 337 aaKnown RBP16.3■□□□□ 0.2
HOMER3-210ENST00000599097 BANF1O75531 89 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 ITGA10O75578 1167 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 CLEC3AO75596 197 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 ZFAND5O76080 213 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 SMIM10L1P0DMW3 83 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 RIPPLY3P57055 190 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 RAB38P57729 211 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 BTN3A2P78410 334 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 BTG2P78543 158 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 ZC3HC1Q86WB0 502 aaKnown RBP16.3■□□□□ 0.2
HOMER3-210ENST00000599097 DOLPP1Q86YN1 238 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 APCDD1LQ8NCL9 501 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 SRFBP1Q8NEF9 429 aaKnown RBP16.3■□□□□ 0.2
HOMER3-210ENST00000599097 NFAM1Q8NET5 270 aaPredicted RBP16.3■□□□□ 0.2
HOMER3-210ENST00000599097 CDKL2Q92772 493 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 DAZLQ92904 295 aaKnown RBP16.3■□□□□ 0.2
HOMER3-210ENST00000599097 KIAA1191Q96A73 305 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 SMIM10Q96HG1 83 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 SPNS1Q9H2V7 528 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 TP63Q9H3D4 680 aaPredicted RBP16.3■□□□□ 0.2
HOMER3-210ENST00000599097 PRTFDC1Q9NRG1 225 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 PNO1Q9NRX1 252 aaKnown RBP16.3■□□□□ 0.2
HOMER3-210ENST00000599097 CLCA3PQ9Y6N3 262 aa16.3■□□□□ 0.2
HOMER3-210ENST00000599097 A8MVJ9 347 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 CCDC188H7C350 402 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 PEX1O43933 1283 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 TPOP07202 933 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 POU4F1Q01851 419 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 SLBPQ14493 270 aaKnown RBP eCLIP16.29■□□□□ 0.2
HOMER3-210ENST00000599097 ELAVL1Q15717 326 aaKnown RBP16.29■□□□□ 0.2
HOMER3-210ENST00000599097 PAGE2BQ5JRK9 111 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 ZNF468Q5VIY5 522 aaPredicted RBP16.29■□□□□ 0.2
HOMER3-210ENST00000599097 IGDCC3Q8IVU1 814 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 SCUBE1Q8IWY4 988 aa16.29■□□□□ 0.2
HOMER3-210ENST00000599097 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.29■□□□□ 0.2
HOMER3-210ENST00000599097 KLHDC8AQ8IYD2 350 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms