RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 CYP4F2P78329 520 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 MAP7Q14244 749 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 MANEAQ5SRI9 462 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 C19orf48Q6RUI8 117 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 EPGNQ6UW88 154 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 PRSS41Q7RTY9 318 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 SPATA21Q7Z572 469 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 VN1R5Q7Z5H4 357 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 RNF175Q8N4F7 328 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 TTC29Q8NA56 475 aaPredicted RBP14.24□□□□□ -0.13
TRIM28-207ENST00000597136 TTLQ8NG68 377 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 SLC13A3Q8WWT9 602 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 PPP1R36Q96LQ0 422 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 SIKE1Q9BRV8 207 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 AICDAQ9GZX7 198 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 CPNE5Q9HCH3 593 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 PFDN4Q9NQP4 134 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 TXLNGQ9NUQ3 528 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 KLHL14Q9P2G3 628 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 ADGRE2Q9UHX3 823 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 IGSF10Q6WRI0 2623 aa14.24□□□□□ -0.13
TRIM28-207ENST00000597136 A0A0G2JND7 137 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 ANKDD1BA6NHY2 528 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 MAGEB17A8MXT2 336 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 FOXE1O00358 373 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-207ENST00000597136 SDHDO14521 159 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 DSCR3O14972 297 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 SNX3O60493 162 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 B3GALT4O96024 378 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 SERPIND1P05546 499 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 HBQ1P09105 142 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 SERPINB1P30740 379 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 IDH3AP50213 366 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 ARSFP54793 590 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 RPS18P62269 152 aaKnown RBP14.23□□□□□ -0.13
TRIM28-207ENST00000597136 DDX39BQ13838 428 aaKnown RBP14.23□□□□□ -0.13
TRIM28-207ENST00000597136 FAM214AQ32MH5 1076 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 SLC9B1Q4ZJI4 515 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 XKR7Q5GH72 579 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 PIGWQ7Z7B1 504 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 ASPGQ86U10 573 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 ZNF473Q8WTR7 871 aaKnown RBP14.23□□□□□ -0.13
TRIM28-207ENST00000597136 CCT6BQ92526 530 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 THAP11Q96EK4 314 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 SEC16BQ96JE7 1060 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 CCNL2Q96S94 520 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-207ENST00000597136 KLHL31Q9H511 634 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 DMRT3Q9NQL9 472 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 ZFP69BQ9UJL9 534 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 CCL27Q9Y4X3 112 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 MAU2Q9Y6X3 613 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 TNRC6AQ8NDV7 1962 aaKnown RBP14.23□□□□□ -0.13
TRIM28-207ENST00000597136 CHD6Q8TD26 2715 aa14.23□□□□□ -0.13
TRIM28-207ENST00000597136 ATRXP46100 2492 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 A0A1B0GX78 115 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 FOXS1O43638 330 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 DIAPH2O60879 1101 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 TBX6O95947 436 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 HSD3B1P14060 373 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 HSD3B2P26439 372 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 GSTM2P28161 218 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 EPHA3P29320 983 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 HYAL2Q12891 473 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 CSTF3Q12996 717 aaKnown RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 NKAIN1Q4KMZ8 207 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 Q6ZSR9 355 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 GBP7Q8N8V2 638 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 CAMKVQ8NCB2 501 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 OR2T11Q8NH01 316 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 ZCCHC10Q8TBK6 192 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 CREB3L4Q8TEY5 395 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 EBF4Q9BQW3 602 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 ACPTQ9BZG2 426 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 WDR55Q9H6Y2 383 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 GPN2Q9H9Y4 310 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 BRF2Q9HAW0 419 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 PPT2Q9UMR5 302 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 SRPK3Q9UPE1 567 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 A0A0A6YYC8 382 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 ATP6AP2A0A1C7CYW4 349 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 I3L1I5 382 aaPredicted RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 SLC28A1O00337 649 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 NDUFS4O43181 175 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 CNOT3O75175 753 aaKnown RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 CLEC3AO75596 197 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 ATP6AP2O75787 350 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 RPS13P62277 151 aaKnown RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 PHEXP78562 749 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 DCDP81605 110 aaKnown RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 HMGCS1Q01581 520 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 DNASE1L3Q13609 305 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 MLIPQ5VWP3 458 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 FAM198BQ6UWH4 519 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 COX15Q7KZN9 410 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 TRPV3Q8NET8 790 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 BCAS4Q8TDM0 211 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 C10orf82Q8WW14 230 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 STON2Q8WXE9 905 aa14.22□□□□□ -0.13
TRIM28-207ENST00000597136 MAELQ96JY0 434 aaKnown RBP14.22□□□□□ -0.13
TRIM28-207ENST00000597136 TMEM120AQ9BXJ8 343 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms