RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ACER2Q5QJU3 275 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 HIST2H2AA3Q6FI13 130 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 PAPD4Q6PIY7 484 aaKnown RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 VN1R5Q7Z5H4 357 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CTAGE4Q8IX94 777 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CENPLQ8N0S6 344 aaPredicted RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 LGI4Q8N135 537 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CA13Q8N1Q1 262 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 SNX31Q8N9S9 440 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 NOA1Q8NC60 698 aaKnown RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 ST6GALNAC3Q8NDV1 305 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 OR2L5Q8NG80 312 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 ELP5Q8TE02 316 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 IFT81Q8WYA0 676 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 TSLPQ969D9 159 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 UBE2E3Q969T4 207 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 QRFPRQ96P65 431 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 RBCK1Q9BYM8 510 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 REXO4Q9GZR2 422 aaKnown RBP9.88□□□□□ -0.83
CCDC9-203ENST00000596938 KCNK13Q9HB14 408 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 SNX15Q9NRS6 342 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 MMACHCQ9Y4U1 282 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 CCDC88CQ9P219 2028 aa9.88□□□□□ -0.83
CCDC9-203ENST00000596938 USP9XQ93008 2570 aaPredicted RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 RP1L1Q8IWN7 2480 aaPredicted RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 TCRBV16S1A1N1A0A5B0 115 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 WIPF3A6NGB9 483 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 K7EPI3 171 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 UBXN8O00124 270 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 CLDN4O14493 209 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 B3GALT2O43825 422 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 PRAMEF2O60811 474 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SEMA7AO75326 666 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 DDAH2O95865 285 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 UQCRHP07919 91 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 EDN3P14138 238 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 TYK2P29597 1187 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SERPINB1P30740 379 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SLC26A5P58743 744 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 ZNF33BQ06732 778 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 TGM3Q08188 693 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 RUNX2Q13950 521 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 ELOAQ14241 798 aaKnown RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 MEP1AQ16819 746 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 ZNF324BQ6AW86 544 aaPredicted RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 METTL2BQ6P1Q9 378 aaKnown RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 ABHD17CQ6PCB6 329 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 FAM180AQ6UWF9 173 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 LAS2Q8IYD9 372 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SLC5A8Q8N695 610 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 BCORP1Q8N888 145 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SRFBP1Q8NEF9 429 aaKnown RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 ARMC2Q8NEN0 867 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 NFAM1Q8NET5 270 aaPredicted RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 DNAJB8Q8NHS0 232 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 KIF18AQ8NI77 898 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SUN3Q8TAQ9 357 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SSC4DQ8WTU2 575 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 UBTD2Q8WUN7 234 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 KCTD4Q8WVF5 259 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SLC44A1Q8WWI5 657 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 CCT6BQ92526 530 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 MRRFQ96E11 262 aaKnown RBP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 GPR78Q96P69 363 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 SERINC2Q96SA4 455 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 FMO2Q99518 471 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC9-203ENST00000596938 NECTIN3Q9NQS3 549 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 PRDM7Q9NQW5 492 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 OPTCQ9UBM4 332 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 ADGRE2Q9UHX3 823 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 ASB1Q9Y576 335 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 PCDHGB6Q9Y5F9 930 aa9.87□□□□□ -0.83
CCDC9-203ENST00000596938 MDC1Q14676 2089 aaKnown RBP9.86□□□□□ -0.83
CCDC9-203ENST00000596938 A0A096LPK6 155 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 SYNDIG1LA6NDD5 238 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 SUPT3HB4E1H0 165 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 CYR61O00622 381 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 KLK8O60259 260 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 SUPT3HO75486 399 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 ALDOAP04075 364 aaKnown RBP9.86□□□□□ -0.83
CCDC9-203ENST00000596938 GP1BBP13224 206 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 EPB42P16452 691 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 MAOAP21397 527 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 ECHS1P30084 290 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 CD96P40200 585 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 SERPINB8P50452 374 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 SERPINB9P50453 376 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 PLA2G16P53816 162 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 ALDH18A1P54886 795 aaKnown RBP9.86□□□□□ -0.83
CCDC9-203ENST00000596938 MTTPP55157 894 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 HSD17B7P56937 341 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 TAS2R50P59544 299 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 IRF9Q00978 393 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 BMPR2Q13873 1038 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 RCN2Q14257 317 aa9.86□□□□□ -0.83
CCDC9-203ENST00000596938 NAA30Q147X3 362 aaPredicted RBP9.86□□□□□ -0.83
CCDC9-203ENST00000596938 UAP1Q16222 522 aaPredicted RBP9.86□□□□□ -0.83
CCDC9-203ENST00000596938 TMEM35AQ53FP2 167 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms