RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 LCA5Q86VQ0 697 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 ACMSDQ8TDX5 336 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 UBLCP1Q8WVY7 318 aaPredicted RBP19.85■□□□□ 0.77
PNKP-209ENST00000596726 PSMF1Q92530 271 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 PHF21BQ96EK2 531 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 FAR2Q96K12 515 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 F2RL3Q96RI0 385 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 WDR77Q9BQA1 342 aaPredicted RBP19.85■□□□□ 0.77
PNKP-209ENST00000596726 TUBB6Q9BUF5 446 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 IPPKQ9H8X2 491 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 PRDM7Q9NQW5 492 aa19.85■□□□□ 0.77
PNKP-209ENST00000596726 CPAMD8Q8IZJ3 1885 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 IGHV3-20A0A0C4DH32 117 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 SORBS2O94875 1100 aaKnown RBP19.84■□□□□ 0.77
PNKP-209ENST00000596726 SLU7O95391 586 aaKnown RBP19.84■□□□□ 0.77
PNKP-209ENST00000596726 CD97P48960 835 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 PLA2G16P53816 162 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 VSNL1P62760 191 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 ABRAXAS2Q15018 415 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 AGAP7PQ5VUJ5 663 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 IRAK1BP1Q5VVH5 260 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 JMJD6Q6NYC1 403 aaPredicted RBP19.84■□□□□ 0.77
PNKP-209ENST00000596726 QSOX2Q6ZRP7 698 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 RIPOR1Q6ZS17 1223 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 UBE3DQ7Z6J8 389 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 TDRPQ86YL5 185 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 AMER2Q8N7J2 671 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 L3MBTL4Q8NA19 623 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 TSLPQ969D9 159 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 AGAP4Q96P64 663 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 ACTR8Q9H981 624 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 TMEM216Q9P0N5 145 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 ADGRE2Q9UHX3 823 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 PCTPQ9UKL6 214 aa19.84■□□□□ 0.77
PNKP-209ENST00000596726 A0A088AWK7 358 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 ESPNB1AK53 854 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 FAM227AF5H4B4 570 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 H0YIV9 168 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 OR7A17O14581 309 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 B4GALT2O60909 372 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 SEC24DO94855 1032 aaPredicted RBP19.83■□□□□ 0.77
PNKP-209ENST00000596726 CELA2AP08217 269 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 PCNAP12004 261 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 ICAM2P13598 275 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 ZNF10P21506 573 aaPredicted RBP19.83■□□□□ 0.77
PNKP-209ENST00000596726 PIK3CBP42338 1070 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 BTG2P78543 158 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 NSDHLQ15738 373 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 SLC6A19Q695T7 634 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 Q8NA96 180 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 TM9SF4Q92544 642 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 PNPLA2Q96AD5 504 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 LMF1Q96S06 567 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 SERINC2Q96SA4 455 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 C1QTNF3Q9BXJ4 246 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 MFRPQ9BY79 579 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 TRIM4Q9C037 500 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 PPCSQ9HAB8 311 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 ZBTB26Q9HCK0 441 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 TBK1Q9UHD2 729 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 PCDHGA11Q9Y5H2 935 aa19.83■□□□□ 0.77
PNKP-209ENST00000596726 B3GALT2O43825 422 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 TGFB1P01137 390 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 RPS17P08708 135 aaKnown RBP19.82■□□□□ 0.76
PNKP-209ENST00000596726 MTTPP55157 894 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 TGM3Q08188 693 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 RASA2Q15283 850 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 TMEM35AQ53FP2 167 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 DEPDC1Q5TB30 811 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 PLAG1Q6DJT9 500 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 SH2D5Q6ZV89 423 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 SRFBP1Q8NEF9 429 aaKnown RBP19.82■□□□□ 0.76
PNKP-209ENST00000596726 HUS1BQ8NHY5 278 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 CMTM7Q96FZ5 175 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 NSUN5Q96P11 429 aaKnown RBP19.82■□□□□ 0.76
PNKP-209ENST00000596726 KCNC2Q96PR1 638 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 NTMT1Q9BV86 223 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 NOL11Q9H8H0 719 aaKnown RBP19.82■□□□□ 0.76
PNKP-209ENST00000596726 RNF11Q9Y3C5 154 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 TENM4Q6N022 2769 aa19.82■□□□□ 0.76
PNKP-209ENST00000596726 PRRC2CQ9Y520 2896 aaKnown RBP19.81■□□□□ 0.76
PNKP-209ENST00000596726 IGKV3D-11A0A0A0MRZ8 115 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 A0A1W2PPM1 405 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 A8MT66 165 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 PYCARD-AS1I3L0S3 204 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 GOLGA8RI6L899 631 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 PSMD12O00232 456 aaPredicted RBP19.81■□□□□ 0.76
PNKP-209ENST00000596726 PRMT3O60678 531 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 SCELO95171 688 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 GSTA1P08263 222 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 ITGAMP11215 1152 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 PYGBP11216 843 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 SOX11P35716 441 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 HSD17B3P37058 310 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 RAB38P57729 211 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 AP2B1P63010 937 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 MFAP5Q13361 173 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 PLEKHN1Q494U1 663 aaPredicted RBP19.81■□□□□ 0.76
PNKP-209ENST00000596726 SFT2D3Q587I9 215 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 CRB2Q5IJ48 1285 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms