RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MFSD4BQ5TF39 518 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 HIST2H2AA3Q6FI13 130 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 RPUSD3Q6P087 351 aaKnown RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 KLC3Q6P597 504 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 ABHD17CQ6PCB6 329 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 LINC00696Q6ZRV3 163 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 TRMT10CQ7L0Y3 403 aaKnown RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 PLD6Q8N2A8 252 aaKnown RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 AMER2Q8N7J2 671 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 OR2L5Q8NG80 312 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 M1APQ8TC57 530 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 ZNF473Q8WTR7 871 aaKnown RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 EXT2Q93063 718 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 TSLPQ969D9 159 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 UBE2E3Q969T4 207 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 TXLNGYQ9BZA5 131 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 REXO4Q9GZR2 422 aaKnown RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 ILKAPQ9H0C8 392 aaPredicted RBP12.27□□□□□ -0.45
USE1-207ENST00000596136 MMP25Q9NPA2 562 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 PTGFRNQ9P2B2 879 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 OPTCQ9UBM4 332 aa12.27□□□□□ -0.45
USE1-207ENST00000596136 A0A088AWK7 358 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 TCRBV16S1A1N1A0A5B0 115 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 ERI3O43414 337 aaKnown RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 PRMT3O60678 531 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 VPS4BO75351 444 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 CDC123O75794 336 aaPredicted RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 EPB42P16452 691 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 ZNF10P21506 573 aaPredicted RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 GCAP28676 217 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 SERPINB1P30740 379 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 MSH2P43246 934 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 GLRBP48167 497 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 TNFSF10P50591 281 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 BTN3A2P78410 334 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 BTG2P78543 158 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 SRSF1Q07955 248 aaKnown RBP eCLIP12.26□□□□□ -0.45
USE1-207ENST00000596136 ZNF169Q14929 603 aaPredicted RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 SFT2D3Q587I9 215 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 ADNP2Q6IQ32 1131 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 PAPD4Q6PIY7 484 aaKnown RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 TAOK1Q7L7X3 1001 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 CISD2Q8N5K1 135 aaKnown RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 SIRT6Q8N6T7 355 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 EIF1ADQ8N9N8 165 aaKnown RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 C19orf60Q96EN9 201 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 FAR2Q96K12 515 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 LPAR4Q99677 370 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 MS4A8Q9BY19 250 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 RBCK1Q9BYM8 510 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 VPS11Q9H270 941 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 L2HGDHQ9H9P8 463 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 PRDM9Q9NQV7 894 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 PRDM7Q9NQW5 492 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 VPS4AQ9UN37 437 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 MMACHCQ9Y4U1 282 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 CLDN16Q9Y5I7 305 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 TNPO3Q9Y5L0 923 aaKnown RBP12.26□□□□□ -0.45
USE1-207ENST00000596136 IKBKGQ9Y6K9 419 aa12.26□□□□□ -0.45
USE1-207ENST00000596136 HECTD1Q9ULT8 2610 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 DYTNA2CJ06 578 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TCP11X1B4DZS4 312 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 FAM227AF5H4B4 570 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 PSMD12O00232 456 aaPredicted RBP12.25□□□□□ -0.45
USE1-207ENST00000596136 RIPK2O43353 540 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 UGDHO60701 494 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 B4GALT2O60909 372 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 SCELO95171 688 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 RBP1P09455 135 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 OR4D2P58180 307 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 PFKFB4Q16877 469 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TSNAXIP1Q2TAA8 658 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 BTBD16Q32M84 506 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TMEM35AQ53FP2 167 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 LIPJQ5W064 366 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 GRHL2Q6ISB3 625 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 MED27Q6P2C8 311 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TRIM40Q6P9F5 258 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 ADGRD1Q6QNK2 874 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TIFABQ6ZNK6 161 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 UBE3DQ7Z6J8 389 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 SCUBE1Q8IWY4 988 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 CNPY4Q8N129 248 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TMEM151AQ8N4L1 468 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 TEX9Q8N6V9 391 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 CATSPER1Q8NEC5 780 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 SRFBP1Q8NEF9 429 aaKnown RBP12.25□□□□□ -0.45
USE1-207ENST00000596136 OR7G3Q8NG95 312 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 ELP5Q8TE02 316 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 ADAMTS18Q8TE60 1221 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 CCT6BQ92526 530 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 PTCHD1Q96NR3 888 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 F2RL3Q96RI0 385 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 SERINC2Q96SA4 455 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 NECTIN3Q9NQS3 549 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 ASF1BQ9NVP2 202 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 ZNF358Q9NW07 568 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 PSD3Q9NYI0 1048 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 KCMF1Q9P0J7 381 aa12.25□□□□□ -0.45
USE1-207ENST00000596136 FETUBQ9UGM5 382 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms