RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 WDPCPO95876 746 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 MYBL2P10244 700 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 TYK2P29597 1187 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 HNRNPH1P31943 449 aaKnown RBP14.35□□□□□ -0.11
TRIM28-203ENST00000593582 SERPINB8P50452 374 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 IRF9Q00978 393 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 TGM3Q08188 693 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 CHIT1Q13231 466 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 TBCCQ15814 346 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 PRAMEF9Q5VWM5 478 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 KLC3Q6P597 504 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 TRIM40Q6P9F5 258 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 FAM180AQ6UWF9 173 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 CENPLQ8N0S6 344 aaPredicted RBP14.35□□□□□ -0.11
TRIM28-203ENST00000593582 AMER2Q8N7J2 671 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 ARMC2Q8NEN0 867 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 OR2L5Q8NG80 312 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 RHEBL1Q8TAI7 183 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 PRR7Q8TB68 274 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 GRHL3Q8TE85 626 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 UBTD2Q8WUN7 234 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 KCTD4Q8WVF5 259 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 UBE2E3Q969T4 207 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 ZNF354BQ96LW1 612 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 NPLQ9BXD5 320 aaPredicted RBP14.35□□□□□ -0.11
TRIM28-203ENST00000593582 CDC42EP4Q9H3Q1 356 aaKnown RBP14.35□□□□□ -0.11
TRIM28-203ENST00000593582 KCNK13Q9HB14 408 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 PRDM9Q9NQV7 894 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 OPTCQ9UBM4 332 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 ZNF490Q9ULM2 529 aaPredicted RBP14.35□□□□□ -0.11
TRIM28-203ENST00000593582 IKBKGQ9Y6K9 419 aa14.35□□□□□ -0.11
TRIM28-203ENST00000593582 SHANK1Q9Y566 2161 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 A0A0G2JN53 185 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 OR5H15A6NDH6 313 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 FAM227AF5H4B4 570 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 K7EPI3 171 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 B3GALT2O43825 422 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 KLHL2O95198 593 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 F10P00742 488 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 INHBAP08476 426 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 EPB42P16452 691 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 EPORP19235 508 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 MAOAP21397 527 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 CASP2P42575 452 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 PLA2G16P53816 162 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 BTG2P78543 158 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 ACAP2Q15057 778 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 ADPRMQ3LIE5 342 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 ACER2Q5QJU3 275 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 H3F3CQ6NXT2 135 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 RPUSD3Q6P087 351 aaKnown RBP14.34□□□□□ -0.11
TRIM28-203ENST00000593582 VN1R5Q7Z5H4 357 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 CYP4X1Q8N118 509 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 CA13Q8N1Q1 262 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 SLC5A8Q8N695 610 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 FAR1Q8WVX9 515 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 SLC44A1Q8WWI5 657 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 TRIM44Q96DX7 344 aaPredicted RBP14.34□□□□□ -0.11
TRIM28-203ENST00000593582 FUT8Q9BYC5 575 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 ABI3Q9P2A4 366 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 ASB1Q9Y576 335 aa14.34□□□□□ -0.11
TRIM28-203ENST00000593582 CNTRLQ7Z7A1 2325 aa14.33□□□□□ -0.11
TRIM28-203ENST00000593582 ALDOAP04075 364 aaKnown RBP14.33□□□□□ -0.12
TRIM28-203ENST00000593582 GFAPP14136 432 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 CD22P20273 847 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 SLC26A5P58743 744 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 TAS2R50P59544 299 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 INAQ16352 499 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 MEP1AQ16819 746 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 PFKFB4Q16877 469 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 UBAP2Q5T6F2 1119 aaKnown RBP14.33□□□□□ -0.12
TRIM28-203ENST00000593582 ADNP2Q6IQ32 1131 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 TAOK1Q7L7X3 1001 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 BCORP1Q8N888 145 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 CEP112Q8N8E3 955 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 ST6GALNAC3Q8NDV1 305 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 ADAMTS18Q8TE60 1221 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 VPS11Q9H270 941 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 COPS7BQ9H9Q2 264 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-203ENST00000593582 MRPS33Q9Y291 106 aaKnown RBP14.33□□□□□ -0.12
TRIM28-203ENST00000593582 MMACHCQ9Y4U1 282 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 ANGPTL3Q9Y5C1 460 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 PTPN13Q12923 2485 aa14.33□□□□□ -0.12
TRIM28-203ENST00000593582 IGKV3D-11A0A0A0MRZ8 115 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 TCRBV16S1A1N1A0A5B0 115 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 CLDN4O14493 209 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 SEMA7AO75326 666 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 TBX6O95947 436 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-203ENST00000593582 PCNAP12004 261 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 MTHFD2P13995 350 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 ECHS1P30084 290 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 MSH2P43246 934 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 SERPINB9P50453 376 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 ALDH18A1P54886 795 aaKnown RBP14.32□□□□□ -0.12
TRIM28-203ENST00000593582 MTTPP55157 894 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 RUNX2Q13950 521 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 E2F2Q14209 437 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 RCN2Q14257 317 aa14.32□□□□□ -0.12
TRIM28-203ENST00000593582 FCRLBQ6BAA4 426 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms