RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 NOTCH3Q9UM47 2321 aa4.36□□□□□ -1.71
FARP1-208ENST00000593548 ATMQ13315 3056 aa4.36□□□□□ -1.71
FARP1-208ENST00000593548 HECTD1Q9ULT8 2610 aa4.36□□□□□ -1.71
FARP1-208ENST00000593548 IGLV3-22A0A075B6J6 115 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 IGHV4-4A0A075B6R2 117 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 A0A087X002 238 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 IGKV3D-20A0A0C4DH25 116 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 A6NCN8 305 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 E7EWF7 191 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 K7ENM7 598 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 XRCC3O43542 346 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 PIGNO95427 931 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 NADKO95544 446 aaPredicted RBP4.35□□□□□ -1.71
FARP1-208ENST00000593548 NKX2-1P43699 371 aaPredicted RBP4.35□□□□□ -1.71
FARP1-208ENST00000593548 OR1G1P47890 313 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 BMXP51813 675 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 PDX1P52945 283 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 SNX16P57768 344 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 CREB5Q02930 508 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 ITPRIPL1Q6GPH6 555 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 TCEAL6Q6IPX3 200 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 SZRD1Q7Z422 152 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 MYPOPQ86VE0 399 aaPredicted RBP4.35□□□□□ -1.71
FARP1-208ENST00000593548 PLA2G4DQ86XP0 818 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 TCEAL3Q969E4 200 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 MAGED4Q96JG8 741 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 LINC00479Q96M42 142 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 LRRC2Q9BYS8 371 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 GCOM2Q9BZD3 368 aaPredicted RBP4.35□□□□□ -1.71
FARP1-208ENST00000593548 PPIL3Q9H2H8 161 aaKnown RBP4.35□□□□□ -1.71
FARP1-208ENST00000593548 ARRDC1-AS1Q9H2J1 176 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 DPAGT1Q9H3H5 408 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 MINDY3Q9H8M7 445 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 LMAN1LQ9HAT1 526 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 PLCXD1Q9NUJ7 323 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 INTS9Q9NV88 658 aaKnown RBP4.35□□□□□ -1.71
FARP1-208ENST00000593548 SUCLA2Q9P2R7 463 aaPredicted RBP4.35□□□□□ -1.71
FARP1-208ENST00000593548 OSGIN1Q9UJX0 560 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 RAB23Q9ULC3 237 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 HES2Q9Y543 173 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 MYO18BQ8IUG5 2567 aa4.35□□□□□ -1.71
FARP1-208ENST00000593548 A0A087WW49 117 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 ERICH2A1L162 156 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 ARL5CA6NH57 179 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 GAPDHSO14556 408 aaPredicted RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 ATP6V0E1O15342 81 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 MAGEB2O15479 319 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 CHMP2AO43633 222 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 ZNF500O60304 480 aaPredicted RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 PRAMEF11O60813 436 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 STBD1O95210 358 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 RAF1P04049 648 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 TPOP07202 933 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 TMOD1P28289 359 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 RPS9P46781 194 aaKnown RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 SLC6A12P48065 614 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 NT5C2P49902 561 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 LUMP51884 338 aaPredicted RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 NAPAP54920 295 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 TPD52P55327 224 aaPredicted RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 PRKCEQ02156 737 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 PNRC1Q12796 327 aaPredicted RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 TRDNQ13061 729 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 P2RY6Q15077 328 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 ADAMTSL4-AS1Q5T5F5 129 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 GRTP1Q5TC63 336 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 FIGLAQ6QHK4 219 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 Q6ZS52 159 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 Q6ZSR9 355 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 FAM43BQ6ZT52 329 aaPredicted RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 CATSPER4Q7RTX7 472 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 COMMD2Q86X83 199 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 RAB42Q8N4Z0 105 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 MCUQ8NE86 351 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 OR5M8Q8NGP6 311 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 URGCPQ8TCY9 931 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 TCEAL4Q96EI5 215 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 CDRT15Q96T59 188 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 TMEM175Q9BSA9 504 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 ZNF577Q9BSK1 485 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 APOL6Q9BWW8 343 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 CXCL16Q9H2A7 254 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 NRBP2Q9NSY0 501 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 FLRT3Q9NZU0 649 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 EXOGQ9Y2C4 368 aaKnown RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 PTRH2Q9Y3E5 179 aaKnown RBP4.34□□□□□ -1.71
FARP1-208ENST00000593548 TICRRQ7Z2Z1 1910 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 ATG2BQ96BY7 2078 aa4.34□□□□□ -1.71
FARP1-208ENST00000593548 CACNA1EQ15878 2313 aa4.34□□□□□ -1.72
FARP1-208ENST00000593548 MGAQ8IWI9 3026 aa4.34□□□□□ -1.72
FARP1-208ENST00000593548 UTP20O75691 2785 aaKnown RBP4.33□□□□□ -1.72
FARP1-208ENST00000593548 SPAG17Q6Q759 2223 aa4.33□□□□□ -1.72
FARP1-208ENST00000593548 GREB1Q4ZG55 1949 aa4.33□□□□□ -1.72
FARP1-208ENST00000593548 LOC101059948A0A1B0GTJ6 334 aa4.33□□□□□ -1.72
FARP1-208ENST00000593548 SMCO2A6NFE2 343 aa4.33□□□□□ -1.72
FARP1-208ENST00000593548 PRR32B1ATL7 298 aa4.33□□□□□ -1.72
FARP1-208ENST00000593548 LRP3O75074 770 aa4.33□□□□□ -1.72
FARP1-208ENST00000593548 AVILO75366 819 aa4.33□□□□□ -1.72
FARP1-208ENST00000593548 PRKRAO75569 313 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms