RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 EID3Q8N140 333 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 CYP4Z2PQ8N1L4 340 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 B3GNT7Q8NFL0 401 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 C16orf52Q8NHV5 167 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 GABPB2Q8TAK5 448 aaPredicted RBP15.26■□□□□ 0.03
LIG1-205ENST00000593425 CREB3L4Q8TEY5 395 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 GRK7Q8WTQ7 553 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 CLK4Q9HAZ1 481 aaKnown RBP15.26■□□□□ 0.03
LIG1-205ENST00000593425 MCCC2Q9HCC0 563 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 COQ3Q9NZJ6 369 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 DYRK1BQ9Y463 629 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 ANKRD17O75179 2603 aaKnown RBP15.26■□□□□ 0.03
LIG1-205ENST00000593425 CELSR1Q9NYQ6 3014 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 URADA6NGE7 173 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 KLRC4-KLRK1H3BQV0 150 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 TGFBR3LH3BV60 316 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 DNALI1O14645 258 aaPredicted RBP15.25■□□□□ 0.03
LIG1-205ENST00000593425 PRKNO60260 465 aaPredicted RBP15.25■□□□□ 0.03
LIG1-205ENST00000593425 ITGA10O75578 1167 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 CAPN3P20807 821 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 PPP2R1BP30154 601 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 FNTAP49354 379 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 CLCN2P51788 898 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 RBBP5Q15291 538 aaKnown RBP15.25■□□□□ 0.03
LIG1-205ENST00000593425 FAM45BPQ6NSW5 357 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 TRMT10BQ6PF06 316 aaKnown RBP15.25■□□□□ 0.03
LIG1-205ENST00000593425 CEP128Q6ZU80 1094 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 LRRC8AQ8IWT6 810 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 RPRMLQ8N4K4 120 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 ZFP62Q8NB50 900 aaPredicted RBP15.25■□□□□ 0.03
LIG1-205ENST00000593425 TRPV3Q8NET8 790 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 OR52N2Q8NGI0 321 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 FAM45AQ8TCE6 357 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 AIF1LQ9BQI0 150 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 FBXW2Q9UKT8 454 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 SLC22A14Q9Y267 594 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 VWA7Q9Y334 891 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 JRKLQ9Y4A0 524 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 CLDN16Q9Y5I7 305 aa15.25■□□□□ 0.03
LIG1-205ENST00000593425 A0A0G2JN53 185 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 CDC7O00311 574 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 SERPINA6P08185 405 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 IGFBP2P18065 325 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 HNRNPFP52597 415 aaKnown RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 PPP1R7Q15435 360 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 BBS9Q3SYG4 887 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 HP1BP3Q5SSJ5 553 aaPredicted RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 C16orf47Q6ZP98 133 aaPredicted RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 SCUBE1Q8IWY4 988 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.24■□□□□ 0.03
LIG1-205ENST00000593425 TMEM156Q8N614 296 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 TMEM52Q8NDY8 209 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 ARMC2Q8NEN0 867 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 NCLNQ969V3 563 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 PDLIM5Q96HC4 596 aaKnown RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 PWWP2AQ96N64 755 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 NAP1L3Q99457 506 aaPredicted RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 PPANQ9NQ55 473 aaKnown RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 NPDC1Q9NQX5 325 aaPredicted RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 PNO1Q9NRX1 252 aaKnown RBP15.24■□□□□ 0.03
LIG1-205ENST00000593425 PLSCR2Q9NRY7 297 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 DEPPQ9NTK1 212 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 ASIC3Q9UHC3 531 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 MMACHCQ9Y4U1 282 aa15.24■□□□□ 0.03
LIG1-205ENST00000593425 POLQO75417 2590 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 NKX2-6A6NCS4 301 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 NPEPPSL1A6NEC2 478 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 FAM90A27PA6NNH2 459 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 PDE9AO76083 593 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 ZNF37AP17032 561 aaPredicted RBP15.23■□□□□ 0.03
LIG1-205ENST00000593425 GPR143P51810 404 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 BTN3A2P78410 334 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 TFF3Q07654 80 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 RUNX2Q13950 521 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 ZNF460Q14592 562 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 TERF2Q15554 542 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 C18orf21Q32NC0 220 aaPredicted RBP15.23■□□□□ 0.03
LIG1-205ENST00000593425 SPNS3Q6ZMD2 512 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 GAL3ST3Q96A11 431 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 CFAP36Q96G28 342 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 VMP1Q96GC9 406 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 NAT9Q9BTE0 207 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 UCK2Q9BZX2 261 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 PRTFDC1Q9NRG1 225 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 KCMF1Q9P0J7 381 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 CORO1CQ9ULV4 474 aaPredicted RBP15.23■□□□□ 0.03
LIG1-205ENST00000593425 PPIEQ9UNP9 301 aaKnown RBP15.23■□□□□ 0.03
LIG1-205ENST00000593425 CHMP2BQ9UQN3 213 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 RNF6Q9Y252 685 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 KCNE2Q9Y6J6 123 aa15.23■□□□□ 0.03
LIG1-205ENST00000593425 PINLYPA6NC86 204 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 TMEM200CA6NKL6 621 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 SAT1P21673 171 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 HNRNPH1P31943 449 aaKnown RBP15.22■□□□□ 0.03
LIG1-205ENST00000593425 ELK3P41970 407 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 EMC4Q5J8M3 183 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 PSD4Q8NDX1 1056 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 ACTRT1Q8TDG2 376 aa15.22■□□□□ 0.03
LIG1-205ENST00000593425 ASB5Q8WWX0 329 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms