RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CLEC3AO75596 197 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 MAOAP21397 527 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 GSTM2P28161 218 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 SLC26A5P58743 744 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 RUNX2Q13950 521 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 ELOAQ14241 798 aaKnown RBP13.03□□□□□ -0.32
APOC1-208ENST00000592535 MROH9Q5TGP6 573 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 FAM180AQ6UWF9 173 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 LRRC70Q7Z2Q7 622 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 CRLF3Q8IUI8 442 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 CENPLQ8N0S6 344 aaPredicted RBP13.03□□□□□ -0.32
APOC1-208ENST00000592535 CYP4X1Q8N118 509 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 ST6GALNAC3Q8NDV1 305 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 SSC4DQ8WTU2 575 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
APOC1-208ENST00000592535 SEC16BQ96JE7 1060 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 FAR2Q96K12 515 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 ZNF354BQ96LW1 612 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 QRFPRQ96P65 431 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 TAAR6Q96RI8 345 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 NPAS2Q99743 824 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 EFCAB11Q9BUY7 163 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 NECTIN3Q9NQS3 549 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 SNX15Q9NRS6 342 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 MTRF1LQ9UGC7 380 aaKnown RBP13.03□□□□□ -0.32
APOC1-208ENST00000592535 TEKT2Q9UIF3 430 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 ACOT9Q9Y305 439 aa13.03□□□□□ -0.32
APOC1-208ENST00000592535 PRRC2CQ9Y520 2896 aaKnown RBP13.02□□□□□ -0.33
APOC1-208ENST00000592535 A0A087X1B8 175 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 IGKV3D-11A0A0A0MRZ8 115 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 MAN1A2O60476 641 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 C2P06681 752 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 PHBP35232 272 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 ST13P50502 369 aaKnown RBP13.02□□□□□ -0.33
APOC1-208ENST00000592535 PLA2G16P53816 162 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 IRF8Q02556 426 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 CHIT1Q13231 466 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 ADPRMQ3LIE5 342 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 ACER2Q5QJU3 275 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 BEST3Q8N1M1 668 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 OR2L5Q8NG80 312 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 UBTD2Q8WUN7 234 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 CDC42EP4Q9H3Q1 356 aaKnown RBP13.02□□□□□ -0.33
APOC1-208ENST00000592535 ACSS3Q9H6R3 686 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 PRDM9Q9NQV7 894 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 ERRFI1Q9UJM3 462 aaPredicted RBP13.02□□□□□ -0.33
APOC1-208ENST00000592535 COL12A1Q99715 3063 aa13.02□□□□□ -0.33
APOC1-208ENST00000592535 A0A096LPK6 155 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 TCRBV16S1A1N1A0A5B0 115 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 A8MUA0 341 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 ESPNB1AK53 854 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 CTAGE8P0CG41 777 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 GP1BBP13224 206 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 MTHFD2P13995 350 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 EDN3P14138 238 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 CERS1P27544 350 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 ECHS1P30084 290 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 MSH2P43246 934 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 HNRNPFP52597 415 aaKnown RBP13.01□□□□□ -0.33
APOC1-208ENST00000592535 RAB38P57729 211 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 LAPTM5Q13571 262 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 E2F2Q14209 437 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 TBCCQ15814 346 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 MEP1AQ16819 746 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 PAGE2BQ5JRK9 111 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 ZNF324BQ6AW86 544 aaPredicted RBP13.01□□□□□ -0.33
APOC1-208ENST00000592535 TRIM40Q6P9F5 258 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 RELL1Q8IUW5 271 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 CTAGE4Q8IX94 777 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 KIF2BQ8N4N8 673 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 BCORP1Q8N888 145 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 TMEM52Q8NDY8 209 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 MNS1Q8NEH6 495 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 ELP5Q8TE02 316 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 IFT81Q8WYA0 676 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 F2RL3Q96RI0 385 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 SLX1AQ9BQ83 275 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 NPLQ9BXD5 320 aaPredicted RBP13.01□□□□□ -0.33
APOC1-208ENST00000592535 FUT8Q9BYC5 575 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 REXO4Q9GZR2 422 aaKnown RBP13.01□□□□□ -0.33
APOC1-208ENST00000592535 OLAHQ9NV23 265 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 OPTCQ9UBM4 332 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 MMACHCQ9Y4U1 282 aa13.01□□□□□ -0.33
APOC1-208ENST00000592535 POLEQ07864 2286 aa13□□□□□ -0.33
APOC1-208ENST00000592535 A0A088AWK7 358 aa13□□□□□ -0.33
APOC1-208ENST00000592535 SAGE2PA6NJ88 616 aa13□□□□□ -0.33
APOC1-208ENST00000592535 K7EPI3 171 aa13□□□□□ -0.33
APOC1-208ENST00000592535 B3GALT2O43825 422 aa13□□□□□ -0.33
APOC1-208ENST00000592535 ZNF500O60304 480 aaPredicted RBP13□□□□□ -0.33
APOC1-208ENST00000592535 PRAMEF2O60811 474 aa13□□□□□ -0.33
APOC1-208ENST00000592535 ACSL3O95573 720 aa13□□□□□ -0.33
APOC1-208ENST00000592535 ALDOAP04075 364 aaKnown RBP13□□□□□ -0.33
APOC1-208ENST00000592535 ZNF10P21506 573 aaPredicted RBP13□□□□□ -0.33
APOC1-208ENST00000592535 TYK2P29597 1187 aa13□□□□□ -0.33
APOC1-208ENST00000592535 CASP2P42575 452 aa13□□□□□ -0.33
APOC1-208ENST00000592535 SERPINB8P50452 374 aa13□□□□□ -0.33
APOC1-208ENST00000592535 TAS2R50P59544 299 aa13□□□□□ -0.33
APOC1-208ENST00000592535 SRSF11Q05519 484 aaKnown RBP13□□□□□ -0.33
APOC1-208ENST00000592535 TUBA3CQ13748 450 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms