RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 C14orf105Q9NVL8 296 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ZFP69BQ9UJL9 534 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 C3orf18Q9UK00 162 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 MRPS2Q9Y399 296 aaKnown RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 SLC22A7Q9Y694 548 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 IGLV3-12A0A075B6K2 115 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 URADA6NGE7 173 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 A6NL46 340 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 B8ZZF3 427 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TRIM49D1C9J1S8 452 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 H0YIG0 161 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SGK494L7N484 410 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 AGPSO00116 658 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CDH16O75309 829 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 HEXBP07686 556 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SNRPAP09012 282 aaKnown RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 GFAPP14136 432 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 GCAP28676 217 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CSRP3P50461 194 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PGDP52209 483 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 EMP2P54851 167 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SLBPQ14493 270 aaKnown RBP eCLIP9.82□□□□□ -0.84
SDF2-208ENST00000589788 HERC3Q15034 1050 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SYT16Q17RD7 645 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 XKR6Q5GH73 641 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 DCAF10Q5QP82 559 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CEP85LQ5SZL2 805 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TCTN3Q6NUS6 607 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TMIGD1Q6UXZ0 262 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ASB18Q6ZVZ8 466 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ABHD13Q7L211 337 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PRSS41Q7RTY9 318 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ZNF605Q86T29 641 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TMEM151BQ8IW70 566 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 RIBC1Q8N443 379 aaPredicted RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 TTLQ8NG68 377 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 NT5CQ8TCD5 201 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 NUDT8Q8WV74 236 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CCT6BQ92526 530 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 MOCOSQ96EN8 888 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PTCD3Q96EY7 689 aaKnown RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 SCYL1Q96KG9 808 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CD244Q9BZW8 370 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 PITHD1Q9GZP4 211 aaPredicted RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 EHD1Q9H4M9 534 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 CPSF2Q9P2I0 782 aaKnown RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 PSMC3IPQ9P2W1 217 aaPredicted RBP9.82□□□□□ -0.84
SDF2-208ENST00000589788 OPTCQ9UBM4 332 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 MED13Q9UHV7 2174 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 FBXL4Q9UKA2 621 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 TP53TG5Q9Y2B4 290 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 NAALAD2Q9Y3Q0 740 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 ANGPTL3Q9Y5C1 460 aa9.82□□□□□ -0.84
SDF2-208ENST00000589788 SPTA1P02549 2419 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 NUP210LQ5VU65 1888 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 ANKDD1BA6NHY2 528 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 IDSB3KWA1 339 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 K7EPI3 171 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 SOCS6O14544 535 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 RDH16O75452 317 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 KLHL18O94889 574 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 SERPINA6P08185 405 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 RBP1P09455 135 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 ZNF888P0CJ79 500 aaPredicted RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 ESRRAP11474 423 aaPredicted RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 COL6A2P12110 1019 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 ALOX12P18054 663 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 GSTM2P28161 218 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 HNF4AP41235 474 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 MAGEA12P43365 314 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 AGTR2P50052 363 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 MAT1AQ00266 395 aaKnown RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 IRF8Q02556 426 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 AIMP2Q13155 320 aaKnown RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 CHIT1Q13231 466 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 LAPTM5Q13571 262 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 HIST2H2ACQ16777 129 aaPredicted RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 PFKFB4Q16877 469 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 KRT71Q3SY84 523 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 TUBB8Q3ZCM7 444 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 DEFB134Q4QY38 66 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 PAGE2BQ5JRK9 111 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 TOR1AIP1Q5JTV8 583 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 MFSD4BQ5TF39 518 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 IRAK1BP1Q5VVH5 260 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 HIST2H2AA3Q6FI13 130 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 FAAH2Q6GMR7 532 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 NIPAL1Q6NVV3 410 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 PTRH1Q86Y79 214 aaKnown RBP9.81□□□□□ -0.84
SDF2-208ENST00000589788 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.81□□□□□ -0.84
SDF2-208ENST00000589788 ANKRD53Q8N9V6 530 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 OR51Q1Q8NH59 317 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 UBTD2Q8WUN7 234 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 ISL2Q96A47 359 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 MTBPQ96DY7 904 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 EFCAB11Q9BUY7 163 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 NT5DC2Q9H857 520 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 GPR83Q9NYM4 423 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 HCN3Q9P1Z3 774 aa9.81□□□□□ -0.84
SDF2-208ENST00000589788 LGALS13Q9UHV8 139 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms