RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ZFAND4Q86XD8 727 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 PDSS2Q86YH6 399 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 DTWD1Q8N5C7 304 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 METTL27Q8N6F8 245 aaPredicted RBP14.4□□□□□ -0.1
ATG4D-211ENST00000589753 SLC38A9Q8NBW4 561 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 RFWD2Q8NHY2 731 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 MMABQ96EY8 250 aaPredicted RBP14.4□□□□□ -0.1
ATG4D-211ENST00000589753 QRFPRQ96P65 431 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 SERINC2Q96SA4 455 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 SCNM1Q9BWG6 230 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 ZNF717Q9BY31 904 aaPredicted RBP14.4□□□□□ -0.1
ATG4D-211ENST00000589753 WDR55Q9H6Y2 383 aaPredicted RBP14.4□□□□□ -0.1
ATG4D-211ENST00000589753 AKTIPQ9H8T0 292 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 LHX9Q9NQ69 397 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 FOXJ2Q9P0K8 574 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 GIMAP2Q9UG22 337 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 DCTN4Q9UJW0 460 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 ADAM29Q9UKF5 820 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 WASF3Q9UPY6 502 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 PCDHGA7Q9Y5G6 932 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 CFAP54Q96N23 3096 aa14.4□□□□□ -0.1
ATG4D-211ENST00000589753 ARHGAP10A1A4S6 786 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 H0YIG0 161 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 SGK494L7N484 410 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 B3GALT2O43825 422 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 SHOX2O60902 331 aaPredicted RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 MYO1DO94832 1006 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 SCELO95171 688 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 KLK1P06870 262 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 SPINK2P20155 84 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ATP5A1P25705 553 aaKnown RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 CERS1P27544 350 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 RORAP35398 523 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 IDH3AP50213 366 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 RPL38P63173 70 aaKnown RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ABHD18Q0P651 414 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 RTP5Q14D33 572 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 KIAA0040Q15053 153 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 RFTN2Q52LD8 501 aaPredicted RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 C6orf136Q5SQH8 315 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 CCNYL2Q5T2Q4 361 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF793Q6ZN11 406 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ACAD11Q709F0 780 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 LARP4Q71RC2 724 aaKnown RBP eCLIP14.39□□□□□ -0.111e-7■■■■■ 27.6
ATG4D-211ENST00000589753 CPLX4Q7Z7G2 160 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ZCCHC7Q8N3Z6 543 aaKnown RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ACOT4Q8N9L9 421 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ACTRT2Q8TDY3 377 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 MAELQ96JY0 434 aaKnown RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 LRFN5Q96NI6 719 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 GBP5Q96PP8 586 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 FAM107BQ9H098 131 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 DDX31Q9H8H2 851 aaKnown RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF304Q9HCX3 659 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 SIRT5Q9NXA8 310 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 TMED5Q9Y3A6 229 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 NEUROG3Q9Y4Z2 214 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 TMEM184BQ9Y519 407 aaPredicted RBP14.39□□□□□ -0.11
ATG4D-211ENST00000589753 MAU2Q9Y6X3 613 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 SPEGQ15772 3267 aa14.39□□□□□ -0.11
ATG4D-211ENST00000589753 A0A0A6YYD5 115 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 A0A0G2JND7 137 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF860A6NHJ4 632 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 SRRM3A6NNA2 597 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 CDRT15L2A8MXV6 281 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 MEN1O00255 615 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 PCDH7O60245 1069 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 RDH16O75452 317 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 EEDO75530 441 aaKnown RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 DXOO77932 396 aaKnown RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 DLGAP3O95886 979 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 GBAP04062 536 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 KLK3P07288 261 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 PRR35P0CG20 571 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 LBPP18428 481 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 AGXTP21549 392 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 DRD4P21917 467 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 TPP2P29144 1249 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 TIA1P31483 386 aaKnown RBP eCLIP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 SLC5A2P31639 672 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 OR1D4P47884 311 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 RAE1P78406 368 aaKnown RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 DCDP81605 110 aaKnown RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 MAD2L1Q13257 205 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 SMU1Q2TAY7 513 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 ZNF385CQ66K41 422 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 NXNQ6DKJ4 435 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 NOXRED1Q6NXP6 359 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 GALNT18Q6P9A2 607 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 CYP20A1Q6UW02 462 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 DSELQ8IZU8 1212 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 AMER3Q8N944 861 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 FNDC5Q8NAU1 212 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 GALNT6Q8NCL4 622 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 CEP70Q8NHQ1 597 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 COL26A1Q96A83 441 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 NXPE2Q96DL1 559 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 C11orf24Q96F05 449 aaPredicted RBP14.38□□□□□ -0.11
ATG4D-211ENST00000589753 OR52B2Q96RD2 323 aa14.38□□□□□ -0.11
ATG4D-211ENST00000589753 DPH2Q9BQC3 489 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms