RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ACOT4Q8N9L9 421 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 OR9A4Q8NGU2 314 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 ZCCHC10Q8TBK6 192 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 C19orf60Q96EN9 201 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 MMABQ96EY8 250 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-218ENST00000589294 C11orf24Q96F05 449 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-218ENST00000589294 PPP3R2Q96LZ3 170 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 ZNF317Q96PQ6 595 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-218ENST00000589294 HBEGFQ99075 208 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 SIKE1Q9BRV8 207 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 MEAF6Q9HAF1 191 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 C1orf109Q9NX04 203 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 TMED5Q9Y3A6 229 aa11.54□□□□□ -0.56
DNMT1-218ENST00000589294 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 ZNF195O14628 629 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 LSM1O15116 133 aaKnown RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 B3GALT2O43825 422 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 SH3BGRLO75368 114 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 SEC22BO75396 215 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 SKAP2O75563 359 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 ALBP02768 609 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 ALOX15P16050 662 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 PCSK2P16519 638 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 IL1RNP18510 177 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 SSR2P43308 183 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 GYS2P54840 703 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 ACSM2AQ08AH3 577 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 KIAA0040Q15053 153 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 PDCD2Q16342 344 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 TBC1D25Q3MII6 688 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 C1orf189Q5VU69 101 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 ACSM2BQ68CK6 577 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 OVCH1Q7RTY7 1134 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 TIPARPQ7Z3E1 657 aaKnown RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 COMMD6Q7Z4G1 85 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 PDSS2Q86YH6 399 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 NLGN4XQ8N0W4 816 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 NLGN4YQ8NFZ3 816 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 COL26A1Q96A83 441 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 C3orf30Q96M34 536 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 ZNF717Q9BY31 904 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 MRPL1Q9BYD6 325 aaKnown RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 NUF2Q9BZD4 464 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 COPS7BQ9H9Q2 264 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 LRTM1Q9HBL6 345 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 LYRM4Q9HD34 91 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 LHX9Q9NQ69 397 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 DKK4Q9UBT3 224 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 MARCOQ9UEW3 520 aaPredicted RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 ANGPTL2Q9UKU9 493 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 WBP11Q9Y2W2 641 aaKnown RBP11.53□□□□□ -0.56
DNMT1-218ENST00000589294 PTGDR2Q9Y5Y4 395 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 USH1CQ9Y6N9 552 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 AKAP13Q12802 2813 aa11.53□□□□□ -0.56
DNMT1-218ENST00000589294 C4orf51C9J302 202 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 SGK494L7N484 410 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 GUCY1B2O75343 617 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 MYO1DO94832 1006 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 JUNP05412 331 aaKnown RBP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 KLK1P06870 262 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 ITGAXP20702 1163 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 LSP1P33241 339 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 OR1D4P47884 311 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 TRA2BP62995 288 aaKnown RBP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 SNRPNP63162 240 aaKnown RBP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 SLAMF1Q13291 335 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 SLC9A5Q14940 896 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 NR6A1Q15406 480 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 ATP6AP1LQ52LC2 224 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 C6orf136Q5SQH8 315 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 CCNYL2Q5T2Q4 361 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 FAM219BQ5XKK7 198 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 CYP20A1Q6UW02 462 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 EPGNQ6UW88 154 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 LARP4Q71RC2 724 aaKnown RBP eCLIP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 MED25Q71SY5 747 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 PRSS41Q7RTY9 318 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 NUDT13Q86X67 352 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 ZFAND4Q86XD8 727 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 DTX1Q86Y01 620 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 C1orf52Q8N6N3 182 aaKnown RBP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 OR2T11Q8NH01 316 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 ACTRT2Q8TDY3 377 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 STON2Q8WXE9 905 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 FGF11Q92914 225 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 MR1Q95460 341 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 FKBP10Q96AY3 582 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 TUBGCP3Q96CW5 907 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 CHMP6Q96FZ7 201 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 APIPQ96GX9 242 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 MAELQ96JY0 434 aaKnown RBP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 TRIM55Q9BYV6 548 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 TGIF2Q9GZN2 237 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 SLC26A1Q9H2B4 701 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 AKTIPQ9H8T0 292 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 MKKSQ9NPJ1 570 aaPredicted RBP11.52□□□□□ -0.57
DNMT1-218ENST00000589294 SLC22A11Q9NSA0 550 aa11.52□□□□□ -0.57
DNMT1-218ENST00000589294 MS4A12Q9NXJ0 267 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms