RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ERVFC1P60507 584 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RPS13P62277 151 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 SELENOWP63302 87 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 UBE3AQ05086 875 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 PPP1R8Q12972 351 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RAPSNQ13702 412 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 E2F2Q14209 437 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 DHCR24Q15392 516 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 HKDC1Q2TB90 917 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ANKRD26P1Q6NSI1 321 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 KLHL35Q6PF15 583 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 UNC5DQ6UXZ4 953 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 PTOV1Q86YD1 416 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 LAS2Q8IYD9 372 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CLECL1Q8IZS7 167 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 OXR1Q8N573 874 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 GPR156Q8NFN8 814 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 TBC1D15Q8TC07 691 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 SPPL2AQ8TCT8 520 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ZFP90Q8TF47 636 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 TRUB1Q8WWH5 349 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 SORCS1Q8WY21 1168 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NEIL2Q969S2 332 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 PPCDCQ96CD2 204 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 WDR34Q96EX3 536 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 OR4K3Q96R72 315 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RAD9AQ99638 391 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 FUNDC2Q9BWH2 189 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 LGR4Q9BXB1 951 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 PREBQ9HCU5 417 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 HMG20AQ9NP66 347 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CCDC177Q9NQR7 707 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NECTIN3Q9NQS3 549 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 THUMPD1Q9NXG2 353 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ATP6V1HQ9UI12 483 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ABCG2Q9UNQ0 655 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 WBP11Q9Y2W2 641 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 MRPS23Q9Y3D9 190 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NAALAD2Q9Y3Q0 740 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 FAM32AQ9Y421 112 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 EDDM13A0A1B0GTR0 161 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 HIDE1A8MVS5 230 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 HOXC11O43248 304 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RGS10O43665 173 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RB1P06400 928 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CTSLP07711 333 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ANXA8P13928 327 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NPPBP16860 134 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF182P17025 639 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ITGB7P26010 798 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CTNNB1P35222 781 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CHI3L1P36222 383 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 BDKRB1P46663 353 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 TBPL1P62380 186 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 DPTQ07507 201 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 FCHO2Q0JRZ9 810 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NPRL3Q12980 569 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 BNIP3Q12983 259 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 PPIGQ13427 754 aaKnown RBP eCLIP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ELAVL3Q14576 367 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 STARD3Q14849 445 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 EIF4HQ15056 248 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NPTX1Q15818 432 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CYP2A13Q16696 494 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CTU2Q2VPK5 515 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 FNDC3BQ53EP0 1204 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 SLC44A4Q53GD3 710 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF648Q5T619 568 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RAET1GQ6H3X3 334 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 IKBIPQ70UQ0 350 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RBM23Q86U06 439 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CYP4Z1Q86W10 505 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 C10orf111Q8N326 155 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RNF175Q8N4F7 328 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ST13P5Q8NFI4 369 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 OR10Q1Q8NGQ4 319 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 GOT1L1Q8NHS2 421 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF480Q8WV37 535 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 SLC5A11Q8WWX8 675 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 S100ZQ8WXG8 99 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 FCGR1BQ92637 280 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 RAD51AP1Q96B01 352 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NUS1Q96E22 293 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 LINC00615Q96LM1 132 aaPredicted RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 COQ10AQ96MF6 247 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 WRAP53Q9BUR4 548 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 SGPP1Q9BX95 441 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 OR2AG1Q9H205 316 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 DUSP21Q9H596 190 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 MIEF1Q9NQG6 463 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 FAM86C1Q9NVL1 165 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 NDRG4Q9ULP0 352 aaKnown RBP7.1□□□□□ -1.27
ZNF540-206ENST00000589117 CYP8B1Q9UNU6 501 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 TSC22D4Q9Y3Q8 395 aa7.1□□□□□ -1.27
ZNF540-206ENST00000589117 DENND4CQ5VZ89 1909 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 C1orf226A1L170 272 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 TNFRSF11BO00300 401 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 NPC1O15118 1278 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 FAM20BO75063 409 aa7.09□□□□□ -1.27
ZNF540-206ENST00000589117 MOSPD3O75425 235 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms