RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TRBV11-1A0A0K0K1C0 115 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 TMEM200CA6NKL6 621 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 FCHO1O14526 889 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 PEX1O43933 1283 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 SERPIND1P05546 499 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 TPOP07202 933 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 HIST1H2AGP0C0S8 130 aaPredicted RBP17.17■□□□□ 0.34
CCDC43-204ENST00000588687 HIST1H2ADP20671 130 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 MSS51Q4VC12 460 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 IGDCC3Q8IVU1 814 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 PPIL6Q8IXY8 311 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 CYP4Z2PQ8N1L4 340 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 PDLIM2Q96JY6 352 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 HIST1H2AHQ96KK5 128 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 HIST1H2AJQ99878 128 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 H2AFJQ9BTM1 129 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 DEFB126Q9BYW3 111 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 PELI2Q9HAT8 420 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 IGSF5Q9NSI5 407 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 COQ3Q9NZJ6 369 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 RNF6Q9Y252 685 aa17.17■□□□□ 0.34
CCDC43-204ENST00000588687 A8MUA0 341 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 FANCGO15287 622 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 PRKNO60260 465 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-204ENST00000588687 ITGA10O75578 1167 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 MYO1DO94832 1006 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 TOXO94900 526 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 ENO2P09104 434 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-204ENST00000588687 MSX1P28360 303 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 PPP2R1BP30154 601 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 HNF4AP41235 474 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 HNRNPFP52597 415 aaKnown RBP17.16■□□□□ 0.34
CCDC43-204ENST00000588687 IL2P60568 153 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 GPR85P60893 370 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 KRTAP21-3Q3LHN1 58 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 TMEM52Q8NDY8 209 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 OR52N2Q8NGI0 321 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 LILRB4Q8NHJ6 448 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 WDR83Q9BRX9 315 aaKnown RBP17.16■□□□□ 0.34
CCDC43-204ENST00000588687 MMACHCQ9Y4U1 282 aa17.16■□□□□ 0.34
CCDC43-204ENST00000588687 A0A0G2JMM0 328 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 A0A1W2PPB8 328 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 A0A1W2PRS3 328 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 PINLYPA6NC86 204 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 NKX2-6A6NCS4 301 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 KIR3DP1A8MWS1 328 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 KLRC4-KLRK1H3BQV0 150 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 GUCA1CO95843 209 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 SERPINA6P08185 405 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 CHRNB4P30926 498 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 CLCN2P51788 898 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 CSHL1Q14406 222 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 HECTD2Q5U5R9 776 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 ARHGAP11AQ6P4F7 1023 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 C16orf47Q6ZP98 133 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-204ENST00000588687 CEP128Q6ZU80 1094 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 TMPRSS11BQ86T26 416 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 DMRTC2Q8IXT2 367 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-204ENST00000588687 TBC1D19Q8N5T2 526 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 TRPV3Q8NET8 790 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 ATL1Q8WXF7 558 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 CERS2Q96G23 380 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 PDLIM5Q96HC4 596 aaKnown RBP17.15■□□□□ 0.34
CCDC43-204ENST00000588687 UCK2Q9BZX2 261 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 TP63Q9H3D4 680 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-204ENST00000588687 ZDHHC11Q9H8X9 412 aa17.15■□□□□ 0.34
CCDC43-204ENST00000588687 ANKHD1Q8IWZ3 2542 aaKnown RBP17.15■□□□□ 0.34
CCDC43-204ENST00000588687 PSMD12O00232 456 aaPredicted RBP17.14■□□□□ 0.33
CCDC43-204ENST00000588687 NRDCO43847 1150 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 CDC40O60508 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCDC43-204ENST00000588687 TTC4O95801 387 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 TBX6O95947 436 aaPredicted RBP17.14■□□□□ 0.33
CCDC43-204ENST00000588687 PDAP1Q13442 181 aaKnown RBP17.14■□□□□ 0.33
CCDC43-204ENST00000588687 TOR1AIP1Q5JTV8 583 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 SPANXN3Q5MJ09 141 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 TEDDM1Q5T9Z0 273 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 NXPE4Q6UWF7 544 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 THOC6Q86W42 341 aaKnown RBP17.14■□□□□ 0.33
CCDC43-204ENST00000588687 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCDC43-204ENST00000588687 PSD4Q8NDX1 1056 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 ASB5Q8WWX0 329 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 VMP1Q96GC9 406 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 SEC16BQ96JE7 1060 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 RHBGQ9H310 441 aa17.14■□□□□ 0.33
CCDC43-204ENST00000588687 URADA6NGE7 173 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 FAM90A27PA6NNH2 459 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 ZNF37AP17032 561 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-204ENST00000588687 HNRNPH1P31943 449 aaKnown RBP17.13■□□□□ 0.33
CCDC43-204ENST00000588687 FNTAP49354 379 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 CCZ1BP86790 482 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 CCZ1P86791 482 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-204ENST00000588687 RUNX2Q13950 521 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 TRMT10BQ6PF06 316 aaKnown RBP17.13■□□□□ 0.33
CCDC43-204ENST00000588687 CCDC71Q8IV32 467 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-204ENST00000588687 NCLNQ969V3 563 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 GAL3ST3Q96A11 431 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 AIF1LQ9BQI0 150 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 KCMF1Q9P0J7 381 aa17.13■□□□□ 0.33
CCDC43-204ENST00000588687 CORO1CQ9ULV4 474 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-204ENST00000588687 SLC22A14Q9Y267 594 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms