RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 PTCD3Q96EY7 689 aaKnown RBP8.33□□□□□ -1.08
SDF2-207ENST00000588472 IMMP1LQ96LU5 166 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 F2RL3Q96RI0 385 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 LMF1Q96S06 567 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 ATOH8Q96SQ7 321 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 PAFAH2Q99487 392 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 WDR77Q9BQA1 342 aaPredicted RBP8.33□□□□□ -1.08
SDF2-207ENST00000588472 TUBB6Q9BUF5 446 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 REXO4Q9GZR2 422 aaKnown RBP8.33□□□□□ -1.08
SDF2-207ENST00000588472 AICDAQ9GZX7 198 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 KCNK13Q9HB14 408 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 LANCL2Q9NS86 450 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 ZNF358Q9NW07 568 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 STMN3Q9NZ72 180 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 GPRC5BQ9NZH0 403 aa8.33□□□□□ -1.08
SDF2-207ENST00000588472 DOPEY2Q9Y3R5 2298 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 EXOC1LA0A1B0GW35 172 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 TCP11X1B4DZS4 312 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 TRIM49D1C9J1S8 452 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 PCDH17O14917 1159 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 B3GALT2O43825 422 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 CLEC3AO75596 197 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 TGFB1P01137 390 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 SMIM10L1P0DMW3 83 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 EPB42P16452 691 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 CD22P20273 847 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 IL10P22301 178 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 JAK1P23458 1154 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 SERPINB9P50453 376 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 SRSF11Q05519 484 aaKnown RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 LAPTM5Q13571 262 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 RUNX2Q13950 521 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 ZNF169Q14929 603 aaPredicted RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 ACAP2Q15057 778 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 NR6A1Q15406 480 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 TEX35Q5T0J7 233 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 ABHD17BQ5VST6 288 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 NIPAL1Q6NVV3 410 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 MED27Q6P2C8 311 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 TRIM40Q6P9F5 258 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 PAPD4Q6PIY7 484 aaKnown RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 RIPOR1Q6ZS17 1223 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 Q6ZS92 163 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 VN1R5Q7Z5H4 357 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 RELL1Q8IUW5 271 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 GSPT2Q8IYD1 628 aaKnown RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 CA13Q8N1Q1 262 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 RNF175Q8N4F7 328 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 FAM47BQ8NA70 645 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 PPP4R1Q8TF05 950 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 SREK1Q8WXA9 508 aaKnown RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 PSMF1Q92530 271 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 GAL3ST3Q96A11 431 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 MTFMTQ96DP5 389 aaKnown RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 PHF21BQ96EK2 531 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 SMIM10Q96HG1 83 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 OR1F2PQ96R84 312 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 LPAR4Q99677 370 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 EFCAB11Q9BUY7 163 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 SLC29A3Q9BZD2 475 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 NT5DC2Q9H857 520 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 COPS7BQ9H9Q2 264 aaPredicted RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 NECTIN3Q9NQS3 549 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 PNO1Q9NRX1 252 aaKnown RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 ANKRD10Q9NXR5 420 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 PLEKHB1Q9UF11 243 aaPredicted RBP8.32□□□□□ -1.08
SDF2-207ENST00000588472 NTNG1Q9Y2I2 539 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 PCDHGA10Q9Y5H3 936 aa8.32□□□□□ -1.08
SDF2-207ENST00000588472 DOCK10Q96BY6 2186 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 NBASA2RRP1 2371 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 A0A088AWK7 358 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 MAGEB17A8MXT2 336 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 RTCAO00442 366 aaKnown RBP8.31□□□□□ -1.08
SDF2-207ENST00000588472 KRT38O76015 456 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 SIX3O95343 332 aaPredicted RBP8.31□□□□□ -1.08
SDF2-207ENST00000588472 WDPCPO95876 746 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 FAM153BP0C7A2 387 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 MTHFD2P13995 350 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 ZNF10P21506 573 aaPredicted RBP8.31□□□□□ -1.08
SDF2-207ENST00000588472 CERS1P27544 350 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 ALDH18A1P54886 795 aaKnown RBP8.31□□□□□ -1.08
SDF2-207ENST00000588472 AP2B1P63010 937 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 TGM3Q08188 693 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 SLC13A2Q13183 592 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 GTF2H2Q13888 395 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 TLR1Q15399 786 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 EXT1Q16394 746 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 FAM153CQ494X1 144 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 PLAG1Q6DJT9 500 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 HIST2H2BCQ6DN03 193 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 GTF2H2CQ6P1K8 395 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 IGFL2Q6UWQ7 119 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 CCDC91Q7Z6B0 441 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 CLNKQ7Z7G1 428 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 KIF2BQ8N4N8 673 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 PTGR2Q8N8N7 351 aaPredicted RBP8.31□□□□□ -1.08
SDF2-207ENST00000588472 GALNT11Q8NCW6 608 aa8.31□□□□□ -1.08
SDF2-207ENST00000588472 PLPP5Q8NEB5 264 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms