RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 AMER3Q8N944 861 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 TTC29Q8NA56 475 aaPredicted RBP17.34■□□□□ 0.37
H3F3B-206ENST00000587560 SLC38A9Q8NBW4 561 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 C10orf82Q8WW14 230 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 N4BP2L2Q92802 583 aaPredicted RBP17.34■□□□□ 0.37
H3F3B-206ENST00000587560 RGMAQ96B86 450 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 MVB12AQ96EY5 273 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 PPP3R2Q96LZ3 170 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 OR52B2Q96RD2 323 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 TAAR9Q96RI9 348 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 TBCDQ9BTW9 1192 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 CCDC28BQ9BUN5 200 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 LRTM1Q9HBL6 345 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 CUTCQ9NTM9 273 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 RIC8BQ9NVN3 520 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 C1orf109Q9NX04 203 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 SLC39A1Q9NY26 324 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 ASIC5Q9NY37 505 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 GIMAP2Q9UG22 337 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 SATB2Q9UPW6 733 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 KALRNO60229 2985 aa17.34■□□□□ 0.37
H3F3B-206ENST00000587560 MYO18BQ8IUG5 2567 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 A0A0A6YYD5 115 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 C9orf172C9J069 976 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 SAP18O00422 153 aaKnown RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 RTCAO00442 366 aaKnown RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 ERI3O43414 337 aaKnown RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 SNX3O60493 162 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 B3GALT4O96024 378 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 TROVE2P10155 538 aaKnown RBP eCLIP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 ATP5A1P25705 553 aaKnown RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 TPP2P29144 1249 aaPredicted RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 EPHA3P29320 983 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 RORAP35398 523 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 ARSFP54793 590 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 HERC3Q15034 1050 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 NR6A1Q15406 480 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 MUM1Q2TAK8 710 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 AP5B1Q2VPB7 878 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 FAM214AQ32MH5 1076 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 SPIN4Q56A73 249 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 OR4C11Q6IEV9 310 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 CEACAM20Q6UY09 585 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 ABHD13Q7L211 337 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 COMMD6Q7Z4G1 85 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 ZCCHC7Q8N3Z6 543 aaKnown RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 DTWD1Q8N5C7 304 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 C1orf52Q8N6N3 182 aaKnown RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 PPP1R36Q96LQ0 422 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 LRFN5Q96NI6 719 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 KCNC2Q96PR1 638 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 C17orf62Q9BQA9 187 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 ZPBPQ9BS86 351 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 SCNM1Q9BWG6 230 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 SORBS1Q9BX66 1292 aaKnown RBP17.33■□□□□ 0.36
H3F3B-206ENST00000587560 SRPK3Q9UPE1 567 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 B3GALT1Q9Y5Z6 326 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 SDK2Q58EX2 2172 aa17.33■□□□□ 0.36
H3F3B-206ENST00000587560 AGRPO00253 132 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 DSCR3O14972 297 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 EEDO75530 441 aaKnown RBP17.32■□□□□ 0.36
H3F3B-206ENST00000587560 NSA2O95478 260 aaKnown RBP17.32■□□□□ 0.36
H3F3B-206ENST00000587560 ZNF28P17035 718 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 PLA2G16P53816 162 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 RAB8AP61006 207 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 EMX2Q04743 252 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 NDUFA9Q16795 377 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 IMPG1Q17R60 797 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 LSM12Q3MHD2 195 aaKnown RBP17.32■□□□□ 0.36
H3F3B-206ENST00000587560 TRIM40Q6P9F5 258 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.32■□□□□ 0.361e-46■■■■□ 20.8
H3F3B-206ENST00000587560 ZCCHC10Q8TBK6 192 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 TUBGCP3Q96CW5 907 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 THOC1Q96FV9 657 aaKnown RBP17.32■□□□□ 0.36
H3F3B-206ENST00000587560 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 CCT8L2Q96SF2 557 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 CTRCQ99895 268 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 TMEM120AQ9BXJ8 343 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 POLR1BQ9H9Y6 1135 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 CLK4Q9HAZ1 481 aaKnown RBP17.32■□□□□ 0.36
H3F3B-206ENST00000587560 AHSPQ9NZD4 102 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 PISDQ9UG56 409 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 DCTN4Q9UJW0 460 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 TMED5Q9Y3A6 229 aa17.32■□□□□ 0.36
H3F3B-206ENST00000587560 TMEM184BQ9Y519 407 aaPredicted RBP17.32■□□□□ 0.36
H3F3B-206ENST00000587560 GOLGA8QA0A0J9YX86 632 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 A0A1B0GX78 115 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 GOLGA8OA6NCC3 632 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 GOLGA8NF8WBI6 632 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 H0YIG0 161 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 DIAPH2O60879 1101 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 DNAJB6O75190 326 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 PEX11AO75192 247 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 SCRG1O75711 98 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 DXOO77932 396 aaKnown RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 FAM107AO95990 144 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 ALDOCP09972 364 aaKnown RBP17.31■□□□□ 0.36
H3F3B-206ENST00000587560 JMJD7P0C870 316 aa17.31■□□□□ 0.36
H3F3B-206ENST00000587560 IL1RNP18510 177 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms