RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 NPLQ9BXD5 320 aaPredicted RBP18.15■□□□□ 0.5
DDX39A-204ENST00000586558 TGIF2Q9GZN2 237 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 ACTL8Q9H568 366 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 COPS7BQ9H9Q2 264 aaPredicted RBP18.15■□□□□ 0.5
DDX39A-204ENST00000586558 CTSFQ9UBX1 484 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 IL17BQ9UHF5 180 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 TCFL5Q9UL49 500 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 SEC16AO15027 2179 aa18.15■□□□□ 0.5
DDX39A-204ENST00000586558 URB1O60287 2271 aaKnown RBP18.15■□□□□ 0.5
DDX39A-204ENST00000586558 SERTM1A2A2V5 107 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 AZIN1O14977 448 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 B3GALT2O43825 422 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 SCELO95171 688 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 CHEK2O96017 543 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 PDYNP01213 254 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 CHRNGP07510 517 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 FGF4P08620 206 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 MTTPP55157 894 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 BTN3A2P78410 334 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 NKG7Q16617 165 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 AP5B1Q2VPB7 878 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 CRTC2Q53ET0 693 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-204ENST00000586558 SGO1Q5FBB7 561 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 KIRREL3Q8IZU9 778 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 RNF175Q8N4F7 328 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 ZSCAN1Q8NBB4 408 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 OR2Y1Q8NGV0 311 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 STARD8Q92502 1023 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 MTFMTQ96DP5 389 aaKnown RBP18.14■□□□□ 0.49
DDX39A-204ENST00000586558 KCNA7Q96RP8 456 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 SHCBP1LQ9BZQ2 653 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 MED4Q9NPJ6 270 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 FARSBQ9NSD9 589 aaKnown RBP18.14■□□□□ 0.49
DDX39A-204ENST00000586558 HCN3Q9P1Z3 774 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 TIMM22Q9Y584 194 aa18.14■□□□□ 0.49
DDX39A-204ENST00000586558 ZNF860A6NHJ4 632 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 VSTM2BA6NLU5 285 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 SRRM3A6NNA2 597 aaPredicted RBP18.13■□□□□ 0.49
DDX39A-204ENST00000586558 ZNF891A8MT65 544 aaPredicted RBP18.13■□□□□ 0.49
DDX39A-204ENST00000586558 KLF7O75840 302 aaPredicted RBP18.13■□□□□ 0.49
DDX39A-204ENST00000586558 HSPA4LO95757 839 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 BGNP21810 368 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 FOLR3P41439 243 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 SSR2P43308 183 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 FOXA1P55317 472 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 TMPRSS3P57727 454 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 PPP2R2AP63151 447 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 STX3Q13277 289 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 TCHHL1Q5QJ38 904 aaPredicted RBP18.13■□□□□ 0.49
DDX39A-204ENST00000586558 OR4C11Q6IEV9 310 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 CCDC81Q6ZN84 652 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 RNF165Q6ZSG1 346 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 UBE3DQ7Z6J8 389 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 OR51Q1Q8NH59 317 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 STT3BQ8TCJ2 826 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 ADAMTS18Q8TE60 1221 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 MIEF2Q96C03 454 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 OR1F2PQ96R84 312 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 TNFRSF12AQ9NP84 129 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 PRDM7Q9NQW5 492 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 AHSPQ9NZD4 102 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 SLC12A4Q9UP95 1085 aa18.13■□□□□ 0.49
DDX39A-204ENST00000586558 MAP1BP46821 2468 aaKnown RBP18.13■□□□□ 0.49
DDX39A-204ENST00000586558 FER1L5A0AVI2 2057 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 A0A0G2JN53 185 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 PLPP1O14494 284 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 CHST10O43529 356 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 CNOT3O75175 753 aaKnown RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 SH3BGRLO75368 114 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 CREG1O75629 220 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ETHE1O95571 254 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 B3GALT4O96024 378 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 CYC1P08574 325 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ZGLP1P0C6A0 271 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ATXN8OSP0DMR3 200 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 RNH1P13489 461 aaKnown RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 HIST1H1TP22492 207 aaPredicted RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ATP5A1P25705 553 aaKnown RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ITPKBP27987 946 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ARRB2P32121 409 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 XCR1P46094 333 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 HTR6P50406 440 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ABCE1P61221 599 aaKnown RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 MAT1AQ00266 395 aaKnown RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 KANK2Q63ZY3 851 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ATG16L1Q676U5 607 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 ZC3H7AQ8IWR0 971 aaKnown RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 CLYBLQ8N0X4 340 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 SPSB2Q99619 263 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 YIPF2Q9BWQ6 316 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 VPS29Q9UBQ0 182 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 PTRH2Q9Y3E5 179 aaKnown RBP18.12■□□□□ 0.49
DDX39A-204ENST00000586558 TRAF6Q9Y4K3 522 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 DMXL2Q8TDJ6 3036 aa18.12■□□□□ 0.49
DDX39A-204ENST00000586558 SAP18O00422 153 aaKnown RBP18.11■□□□□ 0.49
DDX39A-204ENST00000586558 EFSO43281 561 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 NR1D1P20393 614 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 CERS1P27544 350 aa18.11■□□□□ 0.49
DDX39A-204ENST00000586558 SLC1A6P48664 564 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms