RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 EHD1Q9H4M9 534 aa15.91■□□□□ 0.14
TRIM47-203ENST00000586495 KLHL1Q9NR64 748 aa15.91■□□□□ 0.14
TRIM47-203ENST00000586495 GRHL1Q9NZI5 618 aa15.91■□□□□ 0.14
TRIM47-203ENST00000586495 COPG2Q9UBF2 871 aa15.91■□□□□ 0.14
TRIM47-203ENST00000586495 SUCOQ9UBS9 1254 aaKnown RBP15.91■□□□□ 0.14
TRIM47-203ENST00000586495 IGKV3D-11A0A0A0MRZ8 115 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 TRGV8A0A0C4DH27 118 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 ERI3O43414 337 aaKnown RBP15.9■□□□□ 0.14
TRIM47-203ENST00000586495 CLEC3AO75596 197 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 MAOAP21397 527 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 CASP6P55212 293 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 ZNF787Q6DD87 383 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 SPINK14Q6IE38 97 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 SLC25A25Q6KCM7 469 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 MTFR2Q6P444 385 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 SLC34A3Q8N130 599 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 SNX31Q8N9S9 440 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 ADAMTS18Q8TE60 1221 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 SCMH1Q96GD3 660 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 TMEM79Q9BSE2 394 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 NECTIN3Q9NQS3 549 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 CD274Q9NZQ7 290 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 LRFN1Q9P244 771 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 RNF112Q9ULX5 631 aa15.9■□□□□ 0.14
TRIM47-203ENST00000586495 MRPS33Q9Y291 106 aaKnown RBP15.9■□□□□ 0.14
TRIM47-203ENST00000586495 LRIT2A6NDA9 550 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 SYNDIG1LA6NDD5 238 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 A8MUA0 341 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 C4orf51C9J302 202 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 FAM227AF5H4B4 570 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 CLDN4O14493 209 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 FCHO1O14526 889 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 TAPBPO15533 448 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 B3GALT2O43825 422 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 MAN1A2O60476 641 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 SP1P08047 785 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 HSPA7P48741 367 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 PLTPP55058 493 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 RAB38P57729 211 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 GPX6P59796 221 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 RAB10P61026 200 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 PMP22Q01453 160 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 ALDH6A1Q02252 535 aaKnown RBP15.89■□□□□ 0.13
TRIM47-203ENST00000586495 LAPTM5Q13571 262 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 RUNX2Q13950 521 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 ZKSCAN8Q15776 578 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-203ENST00000586495 HIST2H2ACQ16777 129 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-203ENST00000586495 KRTCAP3Q53RY4 240 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 HIST2H2AA3Q6FI13 130 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 TRIM40Q6P9F5 258 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 STAG3L4Q8TBR4 150 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 KIAA1191Q96A73 305 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 MS4A6EQ96DS6 147 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 PTCD3Q96EY7 689 aaKnown RBP15.89■□□□□ 0.13
TRIM47-203ENST00000586495 UBXN10Q96LJ8 280 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 EFCAB11Q9BUY7 163 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 DEFB126Q9BYW3 111 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 REXO4Q9GZR2 422 aaKnown RBP15.89■□□□□ 0.13
TRIM47-203ENST00000586495 AICDAQ9GZX7 198 aa15.89■□□□□ 0.13
TRIM47-203ENST00000586495 A0A0G2JN53 185 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 ASPDHA6ND91 283 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 CCNT2O60583 730 aaKnown RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 TPP2P29144 1249 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 HNRNPH1P31943 449 aaKnown RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 STX2P32856 288 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 CYB561P49447 251 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 ST13P50502 369 aaKnown RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 CLCN2P51788 898 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 PLA2G16P53816 162 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 HSD17B7P56937 341 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 ETF1P62495 437 aaKnown RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 TGM3Q08188 693 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 RCN2Q14257 317 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 TERF2Q15554 542 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 OR4D1Q15615 310 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 PDK4Q16654 411 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 KBTBD12Q3ZCT8 623 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 FBXO48Q5FWF7 155 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 XKR6Q5GH73 641 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 PAGE2BQ5JRK9 111 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 RAPH1Q70E73 1250 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 GALNTL5Q7Z4T8 443 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 CCDC25Q86WR0 208 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 KIF2BQ8N4N8 673 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 PPM1NQ8N819 430 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 PDPRQ8NCN5 879 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 NFAM1Q8NET5 270 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 OR2L5Q8NG80 312 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 FBXO25Q8TCJ0 367 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 THAP3Q8WTV1 239 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 ESAMQ96AP7 390 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 TMEM125Q96AQ2 219 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 HES7Q9BYE0 225 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 COPS7BQ9H9Q2 264 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 PRTFDC1Q9NRG1 225 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 PTBP2Q9UKA9 531 aaKnown RBP15.88■□□□□ 0.13
TRIM47-203ENST00000586495 MYO7BQ6PIF6 2116 aa15.88■□□□□ 0.13
TRIM47-203ENST00000586495 CACNA1DQ01668 2161 aa15.87■□□□□ 0.13
TRIM47-203ENST00000586495 UTP20O75691 2785 aaKnown RBP15.87■□□□□ 0.13
TRIM47-203ENST00000586495 CROCCQ5TZA2 2017 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms