RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 DIAPH2O60879 1101 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 MLYCDO95822 493 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 HIST1H2AGP0C0S8 130 aaPredicted RBP10.85□□□□□ -0.67
LIG3-207ENST00000586119 TFEBP19484 476 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 HIST1H2ADP20671 130 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 TRHRP34981 398 aaPredicted RBP10.85□□□□□ -0.67
LIG3-207ENST00000586119 PTGS2P35354 604 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 RGS4P49798 205 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 HNRNPFP52597 415 aaKnown RBP10.85□□□□□ -0.67
LIG3-207ENST00000586119 PWP1Q13610 501 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 RUNX2Q13950 521 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 RBBP5Q15291 538 aaKnown RBP10.85□□□□□ -0.67
LIG3-207ENST00000586119 CMPK2Q5EBM0 449 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 EMC4Q5J8M3 183 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 TOR1AIP1Q5JTV8 583 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 ARMC3Q5W041 872 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 DUPD1Q68J44 220 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 MAATS1Q7Z4T9 603 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 CDH24Q86UP0 819 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 CD163Q86VB7 1156 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 CCDC71Q8IV32 467 aaPredicted RBP10.85□□□□□ -0.67
LIG3-207ENST00000586119 PALM2Q8IXS6 379 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 LMNTD2Q8IXW0 634 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 LGI4Q8N135 537 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 CA13Q8N1Q1 262 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 HORMAD2Q8N7B1 307 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 APCDD1LQ8NCL9 501 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 TMEM52Q8NDY8 209 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 FAM57AQ8TBR7 257 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 CALML6Q8TD86 181 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 CA5BP1Q8WTZ4 195 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 PHF10Q8WUB8 498 aaKnown RBP10.85□□□□□ -0.67
LIG3-207ENST00000586119 NRGNQ92686 78 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 C14orf79Q96F83 325 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 HIST1H2AHQ96KK5 128 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 HIST1H2AJQ99878 128 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 HAUS8Q9BT25 410 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 H2AFJQ9BTM1 129 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 DEFB126Q9BYW3 111 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 DEFB127Q9H1M4 99 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 MCCC2Q9HCC0 563 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 DEPPQ9NTK1 212 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 TAS2R13Q9NYV9 303 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 ZFP69BQ9UJL9 534 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 CLDN16Q9Y5I7 305 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 AKAP6Q13023 2319 aa10.85□□□□□ -0.67
LIG3-207ENST00000586119 FREM3P0C091 2139 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 TRBV11-1A0A0K0K1C0 115 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 TMEM200CA6NKL6 621 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 FAM90A27PA6NNH2 459 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CDC7O00311 574 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 TFECO14948 347 aaPredicted RBP10.84□□□□□ -0.67
LIG3-207ENST00000586119 MYO1DO94832 1006 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CTAGE8P0CG41 777 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CCND1P24385 295 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 DR1Q01658 176 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 SP140Q13342 867 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CSHL1Q14406 222 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CRYMQ14894 314 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 PPP1R7Q15435 360 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 XKR6Q5GH73 641 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 RNASEH2BQ5TBB1 312 aaKnown RBP10.84□□□□□ -0.67
LIG3-207ENST00000586119 HECTD2Q5U5R9 776 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 QSOX2Q6ZRP7 698 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CTAGE4Q8IX94 777 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 KLHL7Q8IXQ5 586 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
LIG3-207ENST00000586119 C16orf52Q8NHV5 167 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CREB3L4Q8TEY5 395 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 CHTF18Q8WVB6 975 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 SLC5A11Q8WWX8 675 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 FBXL8Q96CD0 374 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 TREX2Q9BQ50 279 aaPredicted RBP10.84□□□□□ -0.67
LIG3-207ENST00000586119 FAM167BQ9BTA0 163 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 SLC6A16Q9GZN6 736 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 PRDM9Q9NQV7 894 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 PNO1Q9NRX1 252 aaKnown RBP10.84□□□□□ -0.67
LIG3-207ENST00000586119 FBXW2Q9UKT8 454 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 RNF6Q9Y252 685 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 SLC22A14Q9Y267 594 aa10.84□□□□□ -0.67
LIG3-207ENST00000586119 NINQ8N4C6 2090 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 A0A0G2JMM0 328 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 A0A1W2PPB8 328 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 A0A1W2PRS3 328 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 KIR3DP1A8MWS1 328 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 G3V3Y1 287 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 ITGA10O75578 1167 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 TOXO94900 526 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 PGAM1P18669 254 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 CAPN3P20807 821 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 JAK1P23458 1154 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 GDF5P43026 501 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 GPR143P51810 404 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 IL2P60568 153 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 BTN3A2P78410 334 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 REEP5Q00765 189 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 TFF3Q07654 80 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 RGS1Q08116 209 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 TEDDM1Q5T9Z0 273 aa10.83□□□□□ -0.68
LIG3-207ENST00000586119 TRMT10BQ6PF06 316 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms