RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 PWP1Q13610 501 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 KIAA0040Q15053 153 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 COL28A1Q2UY09 1125 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 CATSPEREQ5SY80 951 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 PHF19Q5T6S3 580 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 IL23RQ5VWK5 629 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 TMEM198Q66K66 360 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 BLOC1S3Q6QNY0 202 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 CYP20A1Q6UW02 462 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 R3HCC1LQ7Z5L2 792 aaKnown RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 PAQR7Q86WK9 346 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 TREML1Q86YW5 311 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 D2HGDHQ8N465 521 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 MCUR1Q96AQ8 359 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 C11orf24Q96F05 449 aaPredicted RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 DEPDC7Q96QD5 511 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 SPNS1Q9H2V7 528 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 PRDM9Q9NQV7 894 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 OCIAD1Q9NX40 245 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 BCAP29Q9UHQ4 241 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 MCM8Q9UJA3 840 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 LEF1Q9UJU2 399 aaPredicted RBP12.05□□□□□ -0.48
VMP1-202ENST00000585847 AP1M2Q9Y6Q5 423 aa12.05□□□□□ -0.48
VMP1-202ENST00000585847 B2RBV5 119 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 CTSVO60911 334 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 SLC35G6P0C7Q6 338 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 CCL4P13236 92 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 FOLR1P15328 257 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 NELFEP18615 380 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 VARSP26640 1264 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 TIA1P31483 386 aaKnown RBP eCLIP12.04□□□□□ -0.48
VMP1-202ENST00000585847 HPCAL1P37235 193 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 PPM1FP49593 454 aaPredicted RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 STXBP1P61764 594 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 SRSF11Q05519 484 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 RGS1Q08116 209 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 ZNF763Q0D2J5 394 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 ART3Q13508 389 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 KCNAB1Q14722 419 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 MMEL1Q495T6 779 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 RFTN2Q52LD8 501 aaPredicted RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 AGKQ53H12 422 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 TCHHL1Q5QJ38 904 aaPredicted RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 C6orf163Q5TEZ5 329 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 KHDRBS2Q5VWX1 349 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 FAM219BQ5XKK7 198 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 NOXRED1Q6NXP6 359 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 FBXO42Q6P3S6 717 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 FIGLAQ6QHK4 219 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 CAMKMTQ7Z624 323 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 NUDT13Q86X67 352 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 SNX32Q86XE0 403 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 PGAM4Q8N0Y7 254 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 METTL4Q8N3J2 472 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 DNAJC22Q8N4W6 341 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 MFSD9Q8NBP5 474 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 POP5Q969H6 163 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 SLC7A6OSQ96CW6 309 aaPredicted RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 HOPXQ9BPY8 73 aaPredicted RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 NLNQ9BYT8 704 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 DPY30Q9C005 99 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 RASSF4Q9H2L5 321 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 RMND5AQ9H871 391 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 ATAD3AQ9NVI7 634 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 PILRAQ9UKJ1 303 aa12.04□□□□□ -0.48
VMP1-202ENST00000585847 RRP15Q9Y3B9 282 aaKnown RBP12.04□□□□□ -0.48
VMP1-202ENST00000585847 GCN1Q92616 2671 aaKnown RBP12.03□□□□□ -0.48
VMP1-202ENST00000585847 CCDC154A6NI56 674 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 MAGEB17A8MXT2 336 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 H0YHG0 523 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 H3BMH7 237 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
VMP1-202ENST00000585847 EEDO75530 441 aaKnown RBP12.03□□□□□ -0.48
VMP1-202ENST00000585847 RASSF9O75901 435 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
VMP1-202ENST00000585847 CAPNS1P04632 268 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 BCKDHAP12694 445 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 HMGCS1Q01581 520 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
VMP1-202ENST00000585847 ADPRMQ3LIE5 342 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 SGO1Q5FBB7 561 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 ZC3H12BQ5HYM0 836 aaKnown RBP12.03□□□□□ -0.48
VMP1-202ENST00000585847 DEPDC1Q5TB30 811 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 ADCK2Q7Z695 626 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 KMT5CQ86Y97 462 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 GALNT15Q8N3T1 639 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 DPP10Q8N608 796 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 VPS37AQ8NEZ2 397 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 CHTF18Q8WVB6 975 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 PMEPA1Q969W9 287 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 RGMAQ96B86 450 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 SPDL1Q96EA4 605 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 FCRL4Q96PJ5 515 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 MTERF1Q99551 399 aaKnown RBP12.03□□□□□ -0.48
VMP1-202ENST00000585847 SH3GL1Q99961 368 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 DPH7Q9BTV6 452 aa12.03□□□□□ -0.48
VMP1-202ENST00000585847 MS4A8Q9BY19 250 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms