RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 OR9Q2Q8NGE9 314 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 REPS1Q96D71 796 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CRELD1Q96HD1 420 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC46A2Q9BY10 475 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF556Q9HAH1 456 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ACER3Q9NUN7 267 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IMPAD1Q9NX62 359 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 KLK4Q9Y5K2 254 aa13.61□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LOC100506127A0A0U1RQW1 187 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SRPRAP08240 638 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FURINP09958 794 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PABPC1P11940 636 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 S100A5P33763 92 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MAPK9P45984 424 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 XCR1P46094 333 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PDE7AQ13946 482 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SOWAHCQ53LP3 525 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CRB2Q5IJ48 1285 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 COMMD6Q7Z4G1 85 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 OXR1Q8N573 874 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PARP16Q8N5Y8 322 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GEMIN6Q8WXD5 167 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HTRA1Q92743 480 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CENPOQ9BU64 300 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RNF167Q9H6Y7 350 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MS4A12Q9NXJ0 267 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IFT52Q9Y366 437 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HCN4Q9Y3Q4 1203 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ALPK3Q96L96 1907 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 J3KTA2 159 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PLK4O00444 970 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF197O14709 1029 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GPR37L1O60883 481 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PDHA2P29803 388 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RECQLP46063 649 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SEPHS1P49903 392 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CDK6Q00534 326 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MPEG1Q2M385 716 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TRIM40Q6P9F5 258 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 POC5Q8NA72 575 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 B3GNT7Q8NFL0 401 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CIDECQ96AQ7 238 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TXNDC15Q96J42 360 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FOPNLQ96NB1 174 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 VPS35Q96QK1 796 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PIP5K1AQ99755 562 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 DUSP12Q9UNI6 340 aa13.6□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PCDH17O14917 1159 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LEFTY1O75610 366 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PTTG1O95997 202 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GBAP04062 536 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CRISP3P54108 245 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TPTEP56180 551 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MC1RQ01726 317 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PTGES3Q15185 160 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SLC5A12Q1EHB4 618 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF630Q2M218 657 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF284Q2VY69 593 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CYP27C1Q4G0S4 372 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF480Q8WV37 535 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PPCDCQ96CD2 204 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 WDR34Q96EX3 536 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CDCA4Q9BXL8 241 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 QPCTLQ9NXS2 382 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SPG21Q9NZD8 308 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ACSL6Q9UKU0 697 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CCL26Q9Y258 94 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ITM2BQ9Y287 266 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CFAP20Q9Y6A4 193 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRAMEF33A0A0G2JMD5 474 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 M0R129 80 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TGM5O43548 720 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PRAMEF10O60809 474 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 IFNA14P01570 189 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TIMP2P16035 220 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 NPPBP16860 134 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CBLP22681 906 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 HOXD12P35452 270 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 UGT2B15P54855 530 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PCBP3P57721 371 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TBPL1P62380 186 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 CYP4F2P78329 520 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TMEM115Q12893 351 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 KCNJ8Q15842 424 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TOR1AIP1Q5JTV8 583 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 C19orf48Q6RUI8 117 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ZNF367Q7RTV3 350 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 TECPR1Q7Z6L1 1165 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 ADIPOR2Q86V24 386 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 RNF130Q86XS8 419 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 LAS2Q8IYD9 372 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 SCAIQ8N9R8 606 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 FAM83FQ8NEG4 500 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 C9orf43Q8TAL5 461 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 MYLIPQ8WY64 445 aa13.59□□□□□ -0.23
CDK5RAP3-237ENST00000585163 EFHD2Q96C19 240 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms