RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 B3GALT2O43825 422 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 CBX6O95503 412 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 WDPCPO95876 746 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 INHBAP08476 426 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 TYK2P29597 1187 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 SERPINB8P50452 374 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 HYAL2Q12891 473 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 CHIT1Q13231 466 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 DOC2AQ14183 400 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 TBCCQ15814 346 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 INAQ16352 499 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 MEP1AQ16819 746 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 TRIM40Q6P9F5 258 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 RELL1Q8IUW5 271 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 SLC5A8Q8N695 610 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 BCORP1Q8N888 145 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 CEP112Q8N8E3 955 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 ST6GALNAC3Q8NDV1 305 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 RHEBL1Q8TAI7 183 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 ADAMTS18Q8TE60 1221 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 GRHL3Q8TE85 626 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 FAR1Q8WVX9 515 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 NXNL1Q96CM4 212 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 FMO2Q99518 471 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 COPS7BQ9H9Q2 264 aaPredicted RBP11.64□□□□□ -0.55
SS18-225ENST00000585121 PRDM9Q9NQV7 894 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 SNX15Q9NRS6 342 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 IGSF5Q9NSI5 407 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 MRPS33Q9Y291 106 aaKnown RBP11.64□□□□□ -0.55
SS18-225ENST00000585121 ANGPTL3Q9Y5C1 460 aa11.64□□□□□ -0.55
SS18-225ENST00000585121 SYNDIG1LA6NDD5 238 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 OR5H15A6NDH6 313 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 K7EPI3 171 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 CLDN4O14493 209 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 DNAJB6O75190 326 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 ACSL3O95573 720 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 F10P00742 488 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 C2P06681 752 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 GFAPP14136 432 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 KCNC1P48547 511 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 PLA2G16P53816 162 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.55
SS18-225ENST00000585121 DLG1Q12959 904 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 BMPR2Q13873 1038 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 ACAP2Q15057 778 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 ACER2Q5QJU3 275 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 SHISA5Q8N114 240 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 CA13Q8N1Q1 262 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 SRFBP1Q8NEF9 429 aaKnown RBP11.63□□□□□ -0.55
SS18-225ENST00000585121 OR2L5Q8NG80 312 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 KCTD4Q8WVF5 259 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 MS4A6EQ96DS6 147 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 WDR34Q96EX3 536 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 ATOH8Q96SQ7 321 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 BARD1Q99728 777 aaKnown RBP11.63□□□□□ -0.55
SS18-225ENST00000585121 ROGDIQ9GZN7 287 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 ACSS3Q9H6R3 686 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 NTNG1Q9Y2I2 539 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 MMACHCQ9Y4U1 282 aa11.63□□□□□ -0.55
SS18-225ENST00000585121 USP9XQ93008 2570 aaPredicted RBP11.63□□□□□ -0.55
SS18-225ENST00000585121 A0A096LPK6 155 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 A0A0G2JN53 185 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 BLACEA4D250 179 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 UBXN8O00124 270 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 PRAMEF2O60811 474 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 DDAH2O95865 285 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 EDN3P14138 238 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 EPB42P16452 691 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 SERPINB1P30740 379 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 HNRNPH1P31943 449 aaKnown RBP11.62□□□□□ -0.55
SS18-225ENST00000585121 CASP2P42575 452 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 SERPINB9P50453 376 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 MTTPP55157 894 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 SLC26A5P58743 744 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 BTG2P78543 158 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 H3F3CQ6NXT2 135 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 MED27Q6P2C8 311 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 CHSY3Q70JA7 882 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 NOA1Q8NC60 698 aaKnown RBP11.62□□□□□ -0.55
SS18-225ENST00000585121 SSC4DQ8WTU2 575 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 UBTD2Q8WUN7 234 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 SERINC2Q96SA4 455 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 UTP23Q9BRU9 249 aaKnown RBP11.62□□□□□ -0.55
SS18-225ENST00000585121 CDC42EP4Q9H3Q1 356 aaKnown RBP11.62□□□□□ -0.55
SS18-225ENST00000585121 OLAHQ9NV23 265 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 ADGRE2Q9UHX3 823 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 DMGDHQ9UI17 866 aaKnown RBP11.62□□□□□ -0.55
SS18-225ENST00000585121 ZNF490Q9ULM2 529 aaPredicted RBP11.62□□□□□ -0.55
SS18-225ENST00000585121 SHANK1Q9Y566 2161 aa11.62□□□□□ -0.55
SS18-225ENST00000585121 FAM227AF5H4B4 570 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 KRT38O76015 456 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 KLHL2O95198 593 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 RASAL1O95294 804 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 CRYABP02511 175 aaKnown RBP11.61□□□□□ -0.55
SS18-225ENST00000585121 PCNAP12004 261 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 MAOAP21397 527 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 GMPRP36959 345 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 MSH2P43246 934 aa11.61□□□□□ -0.55
SS18-225ENST00000585121 RAB38P57729 211 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms