RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 IGLV5-39A0A0G2JS06 123 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM92AA1XBS5 289 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 MAGEA13PA6NCF6 341 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 WIPF3A6NGB9 483 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRC3CA6NJW4 275 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 C15orf62A8K5M9 175 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 E5RJQ4 531 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 PRYO14603 147 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF217O75362 1048 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TDP2O95551 362 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CHRNA1P02708 482 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TUBBP07437 444 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TDGF1P13385 188 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 HOXD3P31249 432 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 STX2P32856 288 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC1A1P43005 524 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FASLGP48023 281 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RPL34P49207 117 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CSRP3P50461 194 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 VAMP7P51809 220 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 NR0B1P51843 470 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 NUDT6P53370 316 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 NAA20P61599 178 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 YPEL5P62699 121 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SIRPAP78324 504 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CYP4F2P78329 520 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CYP24A1Q07973 514 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 KRT31Q15323 416 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RBMS2Q15434 407 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 PSMD5Q16401 504 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ACKR1Q16570 336 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 UGCGQ16739 394 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 EPC2Q52LR7 807 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SPATA46Q5T0L3 261 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 LRIF1Q5T3J3 769 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRC38Q5VT99 294 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 MACC1Q6ZN28 852 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 COLCA1Q6ZS62 124 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 PIGWQ7Z7B1 504 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TIGD4Q8IY51 512 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 BATF2Q8N1L9 274 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ATP6V0D2Q8N8Y2 350 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 HJURPQ8NCD3 748 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 DBF4BQ8NFT6 615 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 OR6C4Q8NGE1 309 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ZFPM2Q8WW38 1151 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ATL1Q8WXF7 558 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 HAUS1Q96CS2 278 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SPDL1Q96EA4 605 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF778Q96MU6 729 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SERPINB11Q96P15 392 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 PANX2Q96RD6 677 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 INTS14Q96SY0 518 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RNPEPL1Q9HAU8 725 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TRPC7Q9HCX4 862 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 POLE3Q9NRF9 147 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TBC1D13Q9NVG8 400 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM45AQ9NWC5 275 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM118AQ9NWS6 357 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 RBAKQ9NYW8 714 aaPredicted RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ACTR3BQ9P1U1 418 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 DNAJB9Q9UBS3 223 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 IL17BQ9UHF5 180 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 CDH7Q9ULB5 785 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 NCKAP1Q9Y2A7 1128 aa1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 ATXN2Q99700 1313 aaKnown RBP1.84□□□□□ -2.12
SMCHD1-211ENST00000584897 SYNJ2BP-COX16A0A087WUM0 186 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 BTNL10A8MVZ5 291 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ANHXE9PGG2 379 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CLDN4O14493 209 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RASGRF2O14827 1237 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 XPO1O14980 1071 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SSX4O60224 188 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PRPSAP2O60256 369 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 GCNT3O95395 438 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PLAUP00749 431 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RETP07949 1114 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 UROSP10746 265 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 HAPLN1P10915 354 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 G6PDP11413 515 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 APEHP13798 732 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CSRP1P21291 193 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 STIP1P31948 543 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CDH5P33151 784 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 HCAR3P49019 387 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MXI1P50539 228 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 HADHBP55084 474 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 SH3BGRP55822 239 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 CLDN2P57739 230 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 KCNK10P57789 538 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MYL5Q02045 173 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ACSM1Q08AH1 577 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 HYAL1Q12794 435 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 PRTGQ2VWP7 1150 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 MYLK3Q32MK0 819 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 KBTBD12Q3ZCT8 623 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRC23Q53EV4 343 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 ENTPD8Q5MY95 495 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 RABGAP1LQ5R372 815 aa1.83□□□□□ -2.12
SMCHD1-211ENST00000584897 TXNDC8Q6A555 127 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms