RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ARFIP2P53365 341 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 FOXK2Q01167 660 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 C6orf136Q5SQH8 315 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 PRAMEF17Q5VTA0 474 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 CGB2Q6NT52 195 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 PRMT9Q6P2P2 845 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 CYP20A1Q6UW02 462 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 SPATA21Q7Z572 469 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 UBE3DQ7Z6J8 389 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 PARP9Q8IXQ6 854 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 PROKR1Q8TCW9 393 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 MMABQ96EY8 250 aaPredicted RBP17.38■□□□□ 0.37
RFFL-211ENST00000584541 SERINC2Q96SA4 455 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 ELAC2Q9BQ52 826 aaKnown RBP17.38■□□□□ 0.37
RFFL-211ENST00000584541 CCDC28BQ9BUN5 200 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 TMEM120AQ9BXJ8 343 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 ULBP3Q9BZM4 244 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 PRDM7Q9NQW5 492 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 SIRT5Q9NXA8 310 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 DHCR7Q9UBM7 475 aaKnown RBP17.38■□□□□ 0.37
RFFL-211ENST00000584541 NAALAD2Q9Y3Q0 740 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 B3GALT1Q9Y5Z6 326 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 A0A0A6YYC8 382 aaPredicted RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 A0A1W2PNU3 283 aaPredicted RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 C4orf51C9J302 202 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 H0YIG0 161 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 I3L1I5 382 aaPredicted RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 PCDH7O60245 1069 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 GALR3O60755 368 aaPredicted RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 KIAA0754O94854 1291 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 NTRK1P04629 796 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 KLK1P06870 262 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 HIST1H1TP22492 207 aaPredicted RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 ATP5A1P25705 553 aaKnown RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 TIA1P31483 386 aaKnown RBP eCLIP17.37■□□□□ 0.37
RFFL-211ENST00000584541 ERVK-8P63133 956 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 RFTN2Q52LD8 501 aaPredicted RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 CCNYL2Q5T2Q4 361 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 LARP4Q71RC2 724 aaKnown RBP eCLIP17.37■□□□□ 0.37
RFFL-211ENST00000584541 SPATA19Q7Z5L4 167 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 MARCH9Q86YJ5 346 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 ZCCHC7Q8N3Z6 543 aaKnown RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 ACOT4Q8N9L9 421 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 OR9A4Q8NGU2 314 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 EBF4Q9BQW3 602 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 NPLQ9BXD5 320 aaPredicted RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 NRSN2Q9GZP1 204 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 DDX31Q9H8H2 851 aaKnown RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 CLK4Q9HAZ1 481 aaKnown RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 NOP53Q9NZM5 478 aaKnown RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 GIMAP2Q9UG22 337 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 MCM8Q9UJA3 840 aa17.37■□□□□ 0.37
RFFL-211ENST00000584541 EIF3LQ9Y262 564 aaKnown RBP17.37■□□□□ 0.37
RFFL-211ENST00000584541 GNG14A0A1W2PPG7 69 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 PMS2P1A4D2B8 440 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 FOXS1O43638 330 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 GUCY1B2O75343 617 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 SCELO95171 688 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 MED26O95402 600 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 FAM107AO95990 144 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 KLK3P07288 261 aaPredicted RBP17.36■□□□□ 0.37
RFFL-211ENST00000584541 PRR35P0CG20 571 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 PIM1P11309 404 aaPredicted RBP17.36■□□□□ 0.37
RFFL-211ENST00000584541 ACPPP15309 386 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 AGXTP21549 392 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 EMX2Q04743 252 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 ABHD18Q0P651 414 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 SF3A3Q12874 501 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■■■ 39.1
RFFL-211ENST00000584541 SLC9A5Q14940 896 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 OGFOD2Q6N063 350 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 NOXRED1Q6NXP6 359 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 GALNT18Q6P9A2 607 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 PMEPA1Q969W9 287 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 LRFN5Q96NI6 719 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 OR52B2Q96RD2 323 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 CCT8L2Q96SF2 557 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 SORBS1Q9BX66 1292 aaKnown RBP17.36■□□□□ 0.37
RFFL-211ENST00000584541 RABEP2Q9H5N1 569 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 KCNK13Q9HB14 408 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 ZNF304Q9HCX3 659 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 LHX9Q9NQ69 397 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 LYARQ9NX58 379 aaKnown RBP17.36■□□□□ 0.37
RFFL-211ENST00000584541 TRIM33Q9UPN9 1127 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 POLR3HQ9Y535 204 aaPredicted RBP17.36■□□□□ 0.37
RFFL-211ENST00000584541 SPACA6W5XKT8 324 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 KNTC1P50748 2209 aa17.36■□□□□ 0.37
RFFL-211ENST00000584541 C9orf172C9J069 976 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 SGK494L7N484 410 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 NVLO15381 856 aaKnown RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 EEDO75530 441 aaKnown RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 STK17BO94768 372 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 B3GALT4O96024 378 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 ANXA4P09525 319 aaPredicted RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 PRPS2P11908 318 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 FBLP22087 321 aaKnown RBP17.35■□□□□ 0.37
RFFL-211ENST00000584541 CERS1P27544 350 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 GSTM5P46439 218 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 MAPK12P53778 367 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 SLAMF1Q13291 335 aa17.35■□□□□ 0.37
RFFL-211ENST00000584541 KIAA0040Q15053 153 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms