RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 EPB42P16452 691 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 CD22P20273 847 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 ZNF10P21506 573 aaPredicted RBP19.21■□□□□ 0.67
SS18-224ENST00000584083 SOX11P35716 441 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 UQCRFS1P47985 274 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 PLA2G16P53816 162 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 TBCCQ15814 346 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 EXT1Q16394 746 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 PFKFB4Q16877 469 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 ABHD17BQ5VST6 288 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 ADNP2Q6IQ32 1131 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 TRIM40Q6P9F5 258 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 PAPD4Q6PIY7 484 aaKnown RBP19.21■□□□□ 0.67
SS18-224ENST00000584083 VN1R5Q7Z5H4 357 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 CYP4X1Q8N118 509 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 CA13Q8N1Q1 262 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 TEX9Q8N6V9 391 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 CATSPER1Q8NEC5 780 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 LPAR4Q99677 370 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 RHOXF2Q9BQY4 288 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 REXO4Q9GZR2 422 aaKnown RBP19.21■□□□□ 0.67
SS18-224ENST00000584083 KCNK13Q9HB14 408 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 PLA2G3Q9NZ20 509 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 CPSF2Q9P2I0 782 aaKnown RBP19.21■□□□□ 0.67
SS18-224ENST00000584083 TEKT2Q9UIF3 430 aa19.21■□□□□ 0.67
SS18-224ENST00000584083 FLNCQ14315 2725 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 B3GALT2O43825 422 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 KRT38O76015 456 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 CASP2P42575 452 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 BTG2P78543 158 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 TGM3Q08188 693 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 SETDB1Q15047 1291 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 OR2L5Q8NG80 312 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 UBE2E3Q969T4 207 aa19.2■□□□□ 0.66
SS18-224ENST00000584083 TCP11X1B4DZS4 312 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 F10P00742 488 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 PCNAP12004 261 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 MAOAP21397 527 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 CNTFP26441 200 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 ALDH18A1P54886 795 aaKnown RBP19.19■□□□□ 0.66
SS18-224ENST00000584083 ZNF33BQ06732 778 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 RUNX2Q13950 521 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 UBAP2LQ14157 1087 aaKnown RBP19.19■□□□□ 0.66
SS18-224ENST00000584083 MED27Q6P2C8 311 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 QSOX2Q6ZRP7 698 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 PLD6Q8N2A8 252 aaKnown RBP19.19■□□□□ 0.66
SS18-224ENST00000584083 ARMC2Q8NEN0 867 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 OR1N1Q8NGS0 311 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 M1APQ8TC57 530 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 SCYL1Q96KG9 808 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 GPR78Q96P69 363 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 F2RL3Q96RI0 385 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 NPLQ9BXD5 320 aaPredicted RBP19.19■□□□□ 0.66
SS18-224ENST00000584083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.19■□□□□ 0.66
SS18-224ENST00000584083 COPS7BQ9H9Q2 264 aaPredicted RBP19.19■□□□□ 0.66
SS18-224ENST00000584083 PRDM9Q9NQV7 894 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 STMN3Q9NZ72 180 aa19.19■□□□□ 0.66
SS18-224ENST00000584083 EXOC1LA0A1B0GW35 172 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 TRIM49D1C9J1S8 452 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 TSFMP43897 325 aaKnown RBP19.18■□□□□ 0.66
SS18-224ENST00000584083 NAA30Q147X3 362 aaPredicted RBP19.18■□□□□ 0.66
SS18-224ENST00000584083 ADPRMQ3LIE5 342 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 TECRLQ5HYJ1 363 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 FCRLBQ6BAA4 426 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 ABHD17CQ6PCB6 329 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 MYLK4Q86YV6 388 aaPredicted RBP19.18■□□□□ 0.66
SS18-224ENST00000584083 DCAKDQ8WVC6 231 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 HAS2Q92819 552 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 QRFPRQ96P65 431 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 SERINC2Q96SA4 455 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 MMP25Q9NPA2 562 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 AGPAT4Q9NRZ5 378 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 ZNF358Q9NW07 568 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 ZNF180Q9UJW8 692 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 NTNG1Q9Y2I2 539 aa19.18■□□□□ 0.66
SS18-224ENST00000584083 FLNBO75369 2602 aaKnown RBP19.17■□□□□ 0.66
SS18-224ENST00000584083 LRRC14BA6NHZ5 514 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 WDPCPO95876 746 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 TBX6O95947 436 aaPredicted RBP19.17■□□□□ 0.66
SS18-224ENST00000584083 RBP1P09455 135 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 MAGEA12P43365 314 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 TNFSF10P50591 281 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 MTTPP55157 894 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 SLC26A5P58743 744 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 MRPL49Q13405 166 aaKnown RBP19.17■□□□□ 0.66
SS18-224ENST00000584083 NR6A1Q15406 480 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 LGSNQ5TDP6 509 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 TRMT10CQ7L0Y3 403 aaKnown RBP19.17■□□□□ 0.66
SS18-224ENST00000584083 OR7G3Q8NG95 312 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 ZNF473Q8WTR7 871 aaKnown RBP19.17■□□□□ 0.66
SS18-224ENST00000584083 ISL2Q96A47 359 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 ZNF354BQ96LW1 612 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 ACTR8Q9H981 624 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 NECTIN3Q9NQS3 549 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 TNPO3Q9Y5L0 923 aaKnown RBP19.17■□□□□ 0.66
SS18-224ENST00000584083 DOPEY2Q9Y3R5 2298 aa19.17■□□□□ 0.66
SS18-224ENST00000584083 TRAV17A0A0B4J275 112 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 A8MUA0 341 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 CLDN4O14493 209 aa19.16■□□□□ 0.66
SS18-224ENST00000584083 KLK8O60259 260 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms