RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ZNF888P0CJ79 500 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-209ENST00000583454 MAT1AQ00266 395 aaKnown RBP23.48■■□□□ 1.35
TSEN54-209ENST00000583454 MYBPC3Q14896 1274 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 SYT16Q17RD7 645 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 ADPRMQ3LIE5 342 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 PLEKHN1Q494U1 663 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-209ENST00000583454 FHL5Q5TD97 284 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 NIPAL1Q6NVV3 410 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 MED27Q6P2C8 311 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 ABHD13Q7L211 337 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 OR7G3Q8NG95 312 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 MIEF2Q96C03 454 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 NTMT1Q9BV86 223 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 SOX17Q9H6I2 414 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-209ENST00000583454 ZNF552Q9H707 407 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-209ENST00000583454 NOL11Q9H8H0 719 aaKnown RBP23.48■■□□□ 1.35
TSEN54-209ENST00000583454 ACTR8Q9H981 624 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 ZBTB26Q9HCK0 441 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 SLAMF7Q9NQ25 335 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 TSC22D4Q9Y3Q8 395 aa23.48■■□□□ 1.35
TSEN54-209ENST00000583454 FFAR3O14843 346 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 GPR42O15529 346 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 AGFG2O95081 481 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 PROCP04070 461 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 MMP11P24347 488 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 HNRNPH1P31943 449 aaKnown RBP23.47■■□□□ 1.35
TSEN54-209ENST00000583454 SOX8P57073 446 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 STXBP1P61764 594 aaKnown RBP23.47■■□□□ 1.35
TSEN54-209ENST00000583454 HERVK_113P63132 956 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 KLC1Q07866 573 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 MRPL49Q13405 166 aaKnown RBP23.47■■□□□ 1.35
TSEN54-209ENST00000583454 DEFB134Q4QY38 66 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 TOR1AIP1Q5JTV8 583 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 HIST2H2BCQ6DN03 193 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 IGFL3Q6UXB1 125 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 GALNT16Q8N428 558 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 OR51Q1Q8NH59 317 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 ZNF483Q8TF39 744 aaPredicted RBP23.47■■□□□ 1.35
TSEN54-209ENST00000583454 ZNF473Q8WTR7 871 aaKnown RBP23.47■■□□□ 1.35
TSEN54-209ENST00000583454 MS4A6EQ96DS6 147 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 C19orf60Q96EN9 201 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 FER1L6-AS2Q96M78 137 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 NSUN5Q96P11 429 aaKnown RBP23.47■■□□□ 1.35
TSEN54-209ENST00000583454 YIPF2Q9BWQ6 316 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 ERVK-6Q9BXR3 956 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 CLK4Q9HAZ1 481 aaKnown RBP23.47■■□□□ 1.35
TSEN54-209ENST00000583454 C14orf105Q9NVL8 296 aa23.47■■□□□ 1.35
TSEN54-209ENST00000583454 C4orf51C9J302 202 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 COPEO14579 308 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 PLIN3O60664 434 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 BMP10O95393 424 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 CLDN9O95484 217 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 IGHEP01854 428 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 IMPDH1P20839 514 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 SERPINB1P30740 379 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 PRKAA2P54646 552 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 RAB8AP61006 207 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 SKP1P63208 163 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 ZNF844Q08AG5 666 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 CCDC153Q494R4 210 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 SHISA6Q6ZSJ9 500 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 LAPTM4BQ86VI4 370 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 SLC22A9Q8IVM8 553 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 ZC3H7AQ8IWR0 971 aaKnown RBP23.46■■□□□ 1.35
TSEN54-209ENST00000583454 C4orf33Q8N1A6 199 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 SEMA3GQ9NS98 782 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 MKS1Q9NXB0 559 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 RNF11Q9Y3C5 154 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 PCDHGA11Q9Y5H2 935 aa23.46■■□□□ 1.35
TSEN54-209ENST00000583454 POLEQ07864 2286 aa23.45■■□□□ 1.35
TSEN54-209ENST00000583454 G3V2L1 256 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 H0YIV9 168 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 RDH16O75452 317 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 B3GALT4O96024 378 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 HPDP32754 393 aaPredicted RBP23.45■■□□□ 1.34
TSEN54-209ENST00000583454 CCNG1P51959 295 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 UNC50Q53HI1 259 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 CRB2Q5IJ48 1285 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 ZNF678Q5SXM1 525 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 SHISA5Q8N114 240 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 CLEC1AQ8NC01 280 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 OR52B6Q8NGF0 335 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 CCT6BQ92526 530 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 ATP6V1E2Q96A05 226 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 GAL3ST3Q96A11 431 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 SNRNP40Q96DI7 357 aaKnown RBP23.45■■□□□ 1.34
TSEN54-209ENST00000583454 CRB3Q9BUF7 120 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 ZBTB20Q9HC78 741 aaPredicted RBP23.45■■□□□ 1.34
TSEN54-209ENST00000583454 HCN3Q9P1Z3 774 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 ADGRE2Q9UHX3 823 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 C3orf18Q9UK00 162 aa23.45■■□□□ 1.34
TSEN54-209ENST00000583454 SCN2AQ99250 2005 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 CCDC151A5D8V7 595 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 ZNF860A6NHJ4 632 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 PEX12O00623 359 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 DNAJB6O75190 326 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 PIK3CBP42338 1070 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 TRAF3Q13114 568 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 ZYG11AQ6WRX3 759 aa23.44■■□□□ 1.34
TSEN54-209ENST00000583454 PRSS58Q8IYP2 241 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms