RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TSNQ15631 228 aaKnown RBP19.64■□□□□ 0.73
CCDC42-203ENST00000581598 ZRSR2Q15696 482 aaKnown RBP19.64■□□□□ 0.73
CCDC42-203ENST00000581598 ZNF766Q5HY98 468 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 MDS2Q8NDY4 140 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 TTLQ8NG68 377 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 ELP5Q8TE02 316 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 CDKL2Q92772 493 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 RHBDF1Q96CC6 855 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 SEC16BQ96JE7 1060 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 NPAS2Q99743 824 aa19.64■□□□□ 0.73
CCDC42-203ENST00000581598 PITHD1Q9GZP4 211 aaPredicted RBP19.64■□□□□ 0.73
CCDC42-203ENST00000581598 B3GALT4O96024 378 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 C1GALT1C1LP0DN25 315 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 RNH1P13489 461 aaKnown RBP19.63■□□□□ 0.73
CCDC42-203ENST00000581598 MST1P26927 711 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 DCTP40126 519 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 SLC12A2P55011 1212 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 OLR1P78380 273 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 TUBA3CQ13748 450 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 RBBP5Q15291 538 aaKnown RBP19.63■□□□□ 0.73
CCDC42-203ENST00000581598 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.63■□□□□ 0.73
CCDC42-203ENST00000581598 CDKL4Q5MAI5 379 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 FCRLBQ6BAA4 426 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 TUBA3EQ6PEY2 450 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 GFRALQ6UXV0 394 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 SLCO4C1Q6ZQN7 724 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 FRA10AC1Q70Z53 315 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 HDXQ7Z353 690 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 TCAIMQ8N3R3 496 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 TSPAN17Q96FV3 270 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 SCMH1Q96GD3 660 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 UTP23Q9BRU9 249 aaKnown RBP19.63■□□□□ 0.73
CCDC42-203ENST00000581598 TMEM109Q9BVC6 243 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 CAPS2Q9BXY5 557 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 PPCSQ9HAB8 311 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 GPRC5BQ9NZH0 403 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 MYO7BQ6PIF6 2116 aa19.63■□□□□ 0.73
CCDC42-203ENST00000581598 IGKV3D-11A0A0A0MRZ8 115 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 PRMT3O60678 531 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 H2AFYO75367 372 aaKnown RBP19.62■□□□□ 0.73
CCDC42-203ENST00000581598 WDR47O94967 919 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 COL8A1P27658 744 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 GGT5P36269 586 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 KCNK10P57789 538 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 RAB8AP61006 207 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 STXBP1P61764 594 aaKnown RBP19.62■□□□□ 0.73
CCDC42-203ENST00000581598 TGFBIQ15582 683 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 LRIG3Q6UXM1 1119 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 SLC44A1Q8WWI5 657 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 PTCHD1Q96NR3 888 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 CPNE1Q99829 537 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 CCDC77Q9BR77 488 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 AICDAQ9GZX7 198 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 EHD1Q9H4M9 534 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 KLHL31Q9H511 634 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 NT5DC2Q9H857 520 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 VIPAS39Q9H9C1 493 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 PRDM9Q9NQV7 894 aa19.62■□□□□ 0.73
CCDC42-203ENST00000581598 MTO1Q9Y2Z2 717 aaKnown RBP19.62■□□□□ 0.73
CCDC42-203ENST00000581598 EXOC1LA0A1B0GW35 172 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 TCRBV16S1A1N1A0A5B0 115 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 B4GALT2O60909 372 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 PIAS1O75925 651 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 GCAP28676 217 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 CD96P40200 585 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 RASA2Q15283 850 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 TOR1AIP1Q5JTV8 583 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 ZNF787Q6DD87 383 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 FJX1Q86VR8 437 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 SLC34A3Q8N130 599 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 CA13Q8N1Q1 262 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 HORMAD2Q8N7B1 307 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 PPM1NQ8N819 430 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 OR2W6PQ8NHA6 318 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 GAL3ST3Q96A11 431 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 ZIM3Q96PE6 472 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 SIGLEC12Q96PQ1 595 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 GPR22Q99680 433 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 RBBP8Q99708 897 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 NPLQ9BXD5 320 aaPredicted RBP19.61■□□□□ 0.73
CCDC42-203ENST00000581598 ZNF446Q9NWS9 450 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 SEC14L3Q9UDX4 400 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 MMACHCQ9Y4U1 282 aa19.61■□□□□ 0.73
CCDC42-203ENST00000581598 ASPDHA6ND91 283 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 SAGE2PA6NJ88 616 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 GABRR3A8MPY1 467 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 C4orf51C9J302 202 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 PSMD12O00232 456 aaPredicted RBP19.6■□□□□ 0.73
CCDC42-203ENST00000581598 MAN1A2O60476 641 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 ZG16O60844 167 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 UNC5CO95185 931 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 GP5P40197 560 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 HNF4AP41235 474 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 GDF5P43026 501 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 ATP6V0D1P61421 351 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 BTG2P78543 158 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 OR1C1Q15619 314 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 C1QL3Q5VWW1 255 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 TMIGD1Q6UXZ0 262 aa19.6■□□□□ 0.73
CCDC42-203ENST00000581598 RPS19BP1Q86WX3 136 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms