RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PSMD12O00232 456 aaPredicted RBP9.9□□□□□ -0.82
RFFL-209ENST00000581265 FCHO1O14526 889 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 DNALI1O14645 258 aaPredicted RBP9.9□□□□□ -0.82
RFFL-209ENST00000581265 BANF1O75531 89 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 IVDP26440 423 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 PTGS2P35354 604 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 HNF4AP41235 474 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 CLCN2P51788 898 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 GPR143P51810 404 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 KRTAP10-9P60411 292 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 REEP5Q00765 189 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 TLE4Q04727 773 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 PPP1R7Q15435 360 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 TERF2Q15554 542 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 PPP1R3AQ16821 1122 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 FAM45BPQ6NSW5 357 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 NXPE4Q6UWF7 544 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 NCCRP1Q6ZVX7 275 aaPredicted RBP9.9□□□□□ -0.82
RFFL-209ENST00000581265 TAOK1Q7L7X3 1001 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 CEP97Q8IW35 865 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 SULF2Q8IWU5 870 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 GPATCH11Q8N954 259 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 B3GNT7Q8NFL0 401 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 FAM45AQ8TCE6 357 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 CREB3L4Q8TEY5 395 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 NANOS1Q8WY41 292 aaKnown RBP9.9□□□□□ -0.82
RFFL-209ENST00000581265 SLCO2A1Q92959 643 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 TSNARE1Q96NA8 513 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 OSBPL9Q96SU4 736 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 REPIN1Q9BWE0 567 aaKnown RBP9.9□□□□□ -0.82
RFFL-209ENST00000581265 PPANQ9NQ55 473 aaKnown RBP9.9□□□□□ -0.82
RFFL-209ENST00000581265 NECTIN3Q9NQS3 549 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 IKZF3Q9UKT9 509 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 PPT2Q9UMR5 302 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 SLC22A14Q9Y267 594 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 KLF13Q9Y2Y9 288 aaPredicted RBP9.9□□□□□ -0.82
RFFL-209ENST00000581265 DYRK1BQ9Y463 629 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 MMACHCQ9Y4U1 282 aa9.9□□□□□ -0.82
RFFL-209ENST00000581265 MTORP42345 2549 aa9.9□□□□□ -0.83
RFFL-209ENST00000581265 A0A1B0GTH9 108 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 A8MUA0 341 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 C4orf51C9J302 202 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 CES2O00748 559 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 NRDCO43847 1150 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 PEX1O43933 1283 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 ZNF37AP17032 561 aaPredicted RBP9.89□□□□□ -0.83
RFFL-209ENST00000581265 PTGER1P34995 402 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 HNMTP50135 292 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 MEOX1P50221 254 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 CDKL1Q00532 357 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 FRG1Q14331 258 aaKnown RBP9.89□□□□□ -0.83
RFFL-209ENST00000581265 RBBP5Q15291 538 aaKnown RBP9.89□□□□□ -0.83
RFFL-209ENST00000581265 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 TRMT10BQ6PF06 316 aaKnown RBP9.89□□□□□ -0.83
RFFL-209ENST00000581265 C3P1Q6ZMU1 363 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 PDIK1LQ8N165 341 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 CA13Q8N1Q1 262 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 ZFP62Q8NB50 900 aaPredicted RBP9.89□□□□□ -0.83
RFFL-209ENST00000581265 FAM57AQ8TBR7 257 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 CA5BP1Q8WTZ4 195 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 SDCCAG3Q96C92 435 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 LRRC39Q96DD0 335 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 NPLQ9BXD5 320 aaPredicted RBP9.89□□□□□ -0.83
RFFL-209ENST00000581265 AICDAQ9GZX7 198 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 RHBGQ9H310 441 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 MCCC2Q9HCC0 563 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 COQ3Q9NZJ6 369 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 SLC17A6Q9P2U8 582 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 ASIC3Q9UHC3 531 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 CLDN16Q9Y5I7 305 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 HRH3Q9Y5N1 445 aa9.89□□□□□ -0.83
RFFL-209ENST00000581265 NAV3Q8IVL0 2385 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 TRBV11-1A0A0K0K1C0 115 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 LRIT2A6NDA9 550 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 CDC7O00311 574 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 CLDN4O14493 209 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 TFECO14948 347 aaPredicted RBP9.88□□□□□ -0.83
RFFL-209ENST00000581265 HS6ST1O60243 411 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 H2AFYO75367 372 aaKnown RBP9.88□□□□□ -0.83
RFFL-209ENST00000581265 ITGA10O75578 1167 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 MYO1DO94832 1006 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 C1GALT1C1LP0DN25 315 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 GNAZP19086 355 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 TFEBP19484 476 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 GSTM2P28161 218 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 ELK3P41970 407 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 HSD17B7P56937 341 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 STXBP1P61764 594 aaKnown RBP9.88□□□□□ -0.83
RFFL-209ENST00000581265 PPP2R2AP63151 447 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 BTN3A2P78410 334 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 RUNX2Q13950 521 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 CMPK2Q5EBM0 449 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 STEAP4Q687X5 459 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 TMEM211Q6ICI0 200 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 SLCO4C1Q6ZQN7 724 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 MDGA2Q7Z553 956 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 TMPRSS11BQ86T26 416 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 SCUBE1Q8IWY4 988 aa9.88□□□□□ -0.83
RFFL-209ENST00000581265 CYP4Z2PQ8N1L4 340 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms