RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 Q8N402 240 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 SLC35F5Q8WV83 523 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 ZNF382Q96SR6 550 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 TMEM248Q9NWD8 314 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 ZNF541Q9H0D2 1346 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 SOCS2O14508 198 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 GLP1RP43220 463 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 KCNAB2Q13303 367 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 LIPKQ5VXJ0 399 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 PNCKQ6P2M8 343 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 NLGN2Q8NFZ4 835 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 SMPDL3BQ92485 455 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 SIGLEC10Q96LC7 697 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 KCNN3Q9UGI6 736 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 SCML2Q9UQR0 700 aa14.05□□□□□ -0.16
CSNK1D-217ENST00000581241 BRAT1Q6PJG6 821 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 RAB11FIP2Q7L804 512 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 ELMOD2Q8IZ81 293 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 GATAD2BQ8WXI9 593 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 HERVK_113Q902F9 699 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 KCNN1Q92952 543 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 PEBP4Q96S96 227 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 TMEM246Q9BRR3 403 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 REEP4Q9H6H4 257 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 FAM118AQ9NWS6 357 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 KLHL33A6NCF5 533 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CAPN14A8MX76 684 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 FKTNO75072 461 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 DUSP11O75319 330 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 ZNF30P17039 623 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 GDF5P43026 501 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CLCA4Q14CN2 919 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 LRRTM4Q86VH4 590 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 UBQLNLQ8IYU4 475 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 MFSD2AQ8NA29 543 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 NEIL3Q8TAT5 605 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 GIMAP2Q9UG22 337 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 EDARQ9UNE0 448 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 A0A1B0GVI7 797 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 BPNT1O95861 308 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 IFNA2P01563 188 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 MYF6P23409 242 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 HTR2AP28223 471 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 AIMP2Q13155 320 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 PLEKHG7Q6ZR37 379 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 LHFPL3Q86UP9 236 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CASTOR1Q8WTX7 329 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 NELL2Q99435 816 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 PCDHB14Q9Y5E9 798 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 HSPE1-MOB4S4R3N1 261 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 KIAA0513O60268 411 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CLDN7O95471 211 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CKMT1AP12532 417 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 GTF2F2P13984 249 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CD97P48960 835 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 HLCSP50747 726 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CTBP2P56545 445 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 C7orf57Q8NEG2 295 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 RELTQ969Z4 430 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 FBXL18Q96ME1 805 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 TRIB3Q96RU7 358 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 DOHHQ9BU89 302 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 RGCCQ9H4X1 137 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 SDHDO14521 159 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 MAT2AP31153 395 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 OR1E2P47887 323 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CDKN1CP49918 316 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 HERV-K104P61576 105 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 RPS24P62847 133 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CD47Q08722 323 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 NRSN1Q8IZ57 195 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 PNPLA2Q96AD5 504 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 SLC5A7Q9GZV3 580 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 PAQR5Q9NXK6 330 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 CLCA3PQ9Y6N3 262 aa14.04□□□□□ -0.16
CSNK1D-217ENST00000581241 BORCS7-ASMTA0A0B4J1R7 106 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 UNC119BA6NIH7 251 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 ANKRD66B4E2M5 251 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 EIF1AYO14602 144 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 OR2B3O76000 313 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 OAS1P00973 400 aaKnown RBP14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 EDNRBP24530 442 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 HTR2BP41595 481 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 ZNF763Q0D2J5 394 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 GINS1Q14691 196 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 ODF4Q2M2E3 257 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.03□□□□□ -0.162e-7■■■■□ 21.4
CSNK1D-217ENST00000581241 TPGS2Q68CL5 300 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 COMMD7Q86VX2 200 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 VNN3Q9NY84 501 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 MGAT4CQ9UBM8 478 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 KCTD3Q9Y597 815 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 FER1L4A9Z1Z3 1794 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 PCDH17O14917 1159 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 AOC2O75106 756 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 RFPL2O75678 378 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 ACP5P13686 325 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 ZNF8P17098 575 aaPredicted RBP14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 GLT8D1Q68CQ7 371 aa14.03□□□□□ -0.16
CSNK1D-217ENST00000581241 RGMBQ6NW40 437 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms