RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 TTLQ8NG68 377 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 MS4A6EQ96DS6 147 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 FAR2Q96K12 515 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 UTP23Q9BRU9 249 aaKnown RBP19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 HES7Q9BYE0 225 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 RAB17Q9H0T7 212 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 CDCP1Q9H5V8 836 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 NT5DC2Q9H857 520 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 CNOT10Q9H9A5 744 aaKnown RBP19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 PRDM9Q9NQV7 894 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 GPRC5BQ9NZH0 403 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 CD274Q9NZQ7 290 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 COPG2Q9UBF2 871 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 ZNF490Q9ULM2 529 aaPredicted RBP19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 CELSR2Q9HCU4 2923 aa19.96■□□□□ 0.79
CSNK1D-215ENST00000580784 ITPR2Q14571 2701 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 IGKV3D-11A0A0A0MRZ8 115 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 TCRBV16S1A1N1A0A5B0 115 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 LRIT2A6NDA9 550 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 A8MUA0 341 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 CLGNO14967 610 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 ERI3O43414 337 aaKnown RBP19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 STK16O75716 305 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 UNC5CO95185 931 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 TBX6O95947 436 aaPredicted RBP19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 TAS2R50P59544 299 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 OR1C1Q15619 314 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 CDKL4Q5MAI5 379 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 C1QL3Q5VWW1 255 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 ADNP2Q6IQ32 1131 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 VN1R5Q7Z5H4 357 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 FJX1Q86VR8 437 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 RPS19BP1Q86WX3 136 aaKnown RBP19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 SNX31Q8N9S9 440 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 FBF1Q8TES7 1133 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 GAL3ST3Q96A11 431 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 KIAA1191Q96A73 305 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 KLHL1Q9NR64 748 aa19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 PTBP2Q9UKA9 531 aaKnown RBP19.95■□□□□ 0.78
CSNK1D-215ENST00000580784 ANKDD1BA6NHY2 528 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 GABRR3A8MPY1 467 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 PER3P56645 1201 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 OC90Q02509 493 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 DLG1Q12959 904 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 DOC2AQ14183 400 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 XKR6Q5GH73 641 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 ZNF787Q6DD87 383 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 CMC1Q7Z7K0 106 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 NFAM1Q8NET5 270 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 EXT2Q93063 718 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 PHACTR1Q9C0D0 580 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 EHD1Q9H4M9 534 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 RNF112Q9ULX5 631 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 PCDHGB6Q9Y5F9 930 aa19.94■□□□□ 0.78
CSNK1D-215ENST00000580784 A0A1B0GUH1 482 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 SAGE2PA6NJ88 616 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 ZG16O60844 167 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 CLEC3AO75596 197 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 CD22P20273 847 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 GSTM2P28161 218 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 PLA2G16P53816 162 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 SLC7A5Q01650 507 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 PDK4Q16654 411 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 ZNF468Q5VIY5 522 aaPredicted RBP19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 RAPH1Q70E73 1250 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 ZNF572Q7Z3I7 529 aaPredicted RBP19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 ISCA2Q86U28 154 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 PDPRQ8NCN5 879 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 QRFPRQ96P65 431 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 NPLQ9BXD5 320 aaPredicted RBP19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 PITHD1Q9GZP4 211 aaPredicted RBP19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 ALG9Q9H6U8 611 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 SEC14L3Q9UDX4 400 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 ASB1Q9Y576 335 aa19.93■□□□□ 0.78
CSNK1D-215ENST00000580784 ESYT3A0FGR9 886 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 CCNT2O60583 730 aaKnown RBP19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 S100BP04271 92 aaPredicted RBP19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 SLC35E2BP0CK96 405 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 EPORP19235 508 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 TFEBP19484 476 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 DCTP40126 519 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 GUCY2DQ02846 1103 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 SLMAPQ14BN4 828 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 EFTUD2Q15029 972 aaKnown RBP eCLIP19.92■□□□□ 0.786e-7■■□□□ 13.3
CSNK1D-215ENST00000580784 ADPRMQ3LIE5 342 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 LGI4Q8N135 537 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 ARMC2Q8NEN0 867 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 OR2L5Q8NG80 312 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 STAG3L4Q8TBR4 150 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 RELTQ969Z4 430 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 WDR34Q96EX3 536 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 PTCD3Q96EY7 689 aaKnown RBP19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 SCMH1Q96GD3 660 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 SEC16BQ96JE7 1060 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 CD244Q9BZW8 370 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 REXO4Q9GZR2 422 aaKnown RBP19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 MMACHCQ9Y4U1 282 aa19.92■□□□□ 0.78
CSNK1D-215ENST00000580784 B3GALT2O43825 422 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 NEURL1O76050 574 aa19.91■□□□□ 0.78
CSNK1D-215ENST00000580784 SP1P08047 785 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms