RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TNFRSF12AQ9NP84 129 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 RAXQ9Y2V3 346 aa14.73□□□□□ -0.05
SS18-216ENST00000580751 GOLGA8QA0A0J9YX86 632 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 A0A1B0GTL3 188 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 GOLGA8OA6NCC3 632 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 LRIT2A6NDA9 550 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 GOLGA8NF8WBI6 632 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 FOXE1O00358 373 aaPredicted RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 MANBAO00462 879 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 KLK10O43240 276 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 RGS14O43566 566 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 NSA2O95478 260 aaKnown RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 ONECUT2O95948 504 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 ALOX12P18054 663 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 ADSLP30566 484 aaPredicted RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 FOXA1P55317 472 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 TGM3Q08188 693 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 HYAL2Q12891 473 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 CSTF3Q12996 717 aaKnown RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 DDX39BQ13838 428 aaKnown RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 DSG2Q14126 1118 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 ADPRMQ3LIE5 342 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 XKR7Q5GH72 579 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 TOR1AIP1Q5JTV8 583 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 ARHGAP40Q5TG30 622 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 CLEC6AQ6EIG7 209 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 ADNP2Q6IQ32 1131 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 LRRC69Q6ZNQ3 347 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 MAVSQ7Z434 540 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 SRFBP1Q8NEF9 429 aaKnown RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 HUS1BQ8NHY5 278 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 WDR20Q8TBZ3 569 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 CT55Q8WUE5 264 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 FKBP10Q96AY3 582 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 CMTM7Q96FZ5 175 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 CENPKQ9BS16 269 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 MS4A8Q9BY19 250 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 NUF2Q9BZD4 464 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 REXO4Q9GZR2 422 aaKnown RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 CHST8Q9H2A9 424 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 GPN2Q9H9Y4 310 aaPredicted RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 BRF2Q9HAW0 419 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 ZNF304Q9HCX3 659 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 TCF7L2Q9NQB0 619 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 DMRT3Q9NQL9 472 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 WDR70Q9NW82 654 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 NMRK1Q9NWW6 199 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 IFT80Q9P2H3 777 aaPredicted RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 GPN3Q9UHW5 284 aaPredicted RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 KCND3Q9UK17 655 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 CROTQ9UKG9 612 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 MRPS2Q9Y399 296 aaKnown RBP14.72□□□□□ -0.05
SS18-216ENST00000580751 FER1L5A0AVI2 2057 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 EPG5Q9HCE0 2579 aa14.72□□□□□ -0.05
SS18-216ENST00000580751 A0A088AWK7 358 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 A0A0A6YYC8 382 aaPredicted RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 TMEM233B4DJY2 109 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 H0YIG0 161 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 I3L1I5 382 aaPredicted RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 SDHDO14521 159 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 FFAR3O14843 346 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 GPR42O15529 346 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 FOXS1O43638 330 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 DIAPH2O60879 1101 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 CD63P08962 238 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 ZNF888P0CJ79 500 aaPredicted RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 IL1RNP18510 177 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 TCN2P20062 427 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 ZNF10P21506 573 aaPredicted RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 FBLP22087 321 aaKnown RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 PRPH2P23942 346 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 HNRNPH1P31943 449 aaKnown RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 DLSTP36957 453 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 RPS15P62841 145 aaKnown RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 NCF4Q15080 339 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 PDCD2Q16342 344 aaPredicted RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 TMEM35AQ53FP2 167 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 OGFOD2Q6N063 350 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 TRIM40Q6P9F5 258 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 FAM198BQ6UWH4 519 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 CHSY3Q70JA7 882 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 METTL27Q8N6F8 245 aaPredicted RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 OR2L5Q8NG80 312 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 UTP15Q8TED0 518 aaKnown RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 COL26A1Q96A83 441 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 MS4A6EQ96DS6 147 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 MMABQ96EY8 250 aaPredicted RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 PPP3R2Q96LZ3 170 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 RILPQ96NA2 401 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 DCBLD2Q96PD2 775 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 MTERF1Q99551 399 aaKnown RBP14.71□□□□□ -0.05
SS18-216ENST00000580751 GPR87Q9BY21 358 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 RABEP2Q9H5N1 569 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 TMEM45AQ9NWC5 275 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 PADI2Q9Y2J8 665 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 TIMM22Q9Y584 194 aa14.71□□□□□ -0.05
SS18-216ENST00000580751 USP24Q9UPU5 2620 aa14.71□□□□□ -0.06
SS18-216ENST00000580751 A0A087WV48 116 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 LOC101059948A0A1B0GTJ6 334 aa14.7□□□□□ -0.06
SS18-216ENST00000580751 PIP5K1BO14986 540 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms